Miyakogusa Predicted Gene

Lj0g3v0128589.3

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0128589.3 tr|G7I4W5|G7I4W5_MEDTR Zinc finger CCCH
domain-containing protein OS=Medicago truncatula
GN=MTR_1g07,37.71,5e-18,P-loop containing nucleoside triphosphate
hydrolases,NULL; no description,NULL; AAA_2,ATPase, AAA-2;,CUFF.7751.3
         (1541 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73723 weakly similar to UniRef100_A7NYE4 Cluster: Chr...  1112   0.0  
gnl|LJGI|FS348230 weakly similar to UniRef100_A7NYE4 Cluster: Ch...   139   6e-32

>gnl|LJGI|TC73723 weakly similar to UniRef100_A7NYE4 Cluster: Chromosome chr6
            scaffold_3, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (11%)
          Length = 736

 Score = 1112 bits (561), Expect = 0.0
 Identities = 567/569 (99%)
 Strand = Plus / Plus

                                                                        
Query: 973  gggagtttcaaagcaacatttctgaataaaagaaagcgaagtgaaggaaatgattccaaa 1032
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    gggagtttcaaagcaacatttctgaataaaagaaagcgaagtgaaggaaatgattccaaa 60

                                                                        
Query: 1033 tgcaagacacaaaaacaggtaagggaggcatcaaggtcttatctggatctgaatatgcct 1092
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tgcaagacacaaaaacaggtaagggaggcatcaaggtcttatctggatctgaatatgcct 120

                                                                        
Query: 1093 ctagaggaggttgacgaggataataatgacagtgattgtgaaaatcaatccatggttgaa 1152
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  ctagaggaggttgacaaggataataatgacagtgattgtgaaaatcaatccatggttgaa 180

                                                                        
Query: 1153 aattctgaagcctggttaagtgatttctgtgatcaaattgatggagaagtggtttttaag 1212
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  aattctgaagcctggttaagtgatttctgtgatcaaattgatggagaagtggtttttaag 240

                                                                        
Query: 1213 ccattcaattttgattcccttgccgagcaagtaatagaatgtgttgagacacgatttcaa 1272
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  ccattcaattttgattcccttgccgagcaagtaatagaatgtgttgagacacgatttcaa 300

                                                                        
Query: 1273 aggacatttggatcagagtttctgctggaaattgattatgaggtcatggcacagatactt 1332
            ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 301  aggacatttggatcagagtttctactggaaattgattatgaggtcatggcacagatactt 360

                                                                        
Query: 1333 gcagctgcatggttatcggacaagaaaaaatctgtggaggattggattgagcatgttgtt 1392
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  gcagctgcatggttatcggacaagaaaaaatctgtggaggattggattgagcatgttgtt 420

                                                                        
Query: 1393 ggaagaagctttgccgaggcgcggcagaagtaccatcaccaccaccctgcagctgaatat 1452
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  ggaagaagctttgccgaggcgcggcagaagtaccatcaccaccaccctgcagctgaatat 480

                                                                        
Query: 1453 gtcatgaaactggttaactgtgaaagcatttttgtggaagagcaagctctaggagtgtgc 1512
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  gtcatgaaactggttaactgtgaaagcatttttgtggaagagcaagctctaggagtgtgc 540

                                         
Query: 1513 cttccagctagaattaacttaaactgaat 1541
            |||||||||||||||||||||||||||||
Sbjct: 541  cttccagctagaattaacttaaactgaat 569


>gnl|LJGI|FS348230 weakly similar to UniRef100_A7NYE4 Cluster: Chromosome chr6
            scaffold_3, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (8%)
          Length = 707

 Score =  139 bits (70), Expect = 6e-32
 Identities = 181/218 (83%)
 Strand = Plus / Minus

                                                                        
Query: 1165 tggttaagtgatttctgtgatcaaattgatggagaagtggtttttaagccattcaatttt 1224
            |||||||||||||||||| ||||| |||||| | |||||| |||||||||||||||||||
Sbjct: 519  tggttaagtgatttctgtaatcaagttgatgaaaaagtggattttaagccattcaatttt 460

                                                                        
Query: 1225 gattcccttgccgagcaagtaatagaatgtgttgagacacgatttcaaaggacatttgga 1284
            |||   ||||| || ||| |  |  || |  ||   | || |||||||||||||||||| 
Sbjct: 459  gatgtgcttgctgaacaaatgttgaaaagcattagcatacaatttcaaaggacatttggt 400

                                                                        
Query: 1285 tcagagtttctgctggaaattgattatgaggtcatggcacagatacttgcagctgcatgg 1344
            |  ||||||| ||||||||||||||||||||| |||||||||||||| |||||||| |||
Sbjct: 399  tttgagtttcagctggaaattgattatgaggtaatggcacagatactcgcagctgcttgg 340

                                                  
Query: 1345 ttatcggacaagaaaaaatctgtggaggattggattga 1382
            ||| | || ||||||||  ||| |||||||||| ||||
Sbjct: 339  ttagcagagaagaaaaatgctgcggaggattgggttga 302