Miyakogusa Predicted Gene

Lj0g3v0128589.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0128589.1 Non Chatacterized Hit- tr|J3LHU7|J3LHU7_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB02G4,25.26,4e-16,GLR3409 PROTEIN,NULL; ATP-DEPENDENT CLP
PROTEASE,NULL; no description,NULL; AAA_2,ATPase, AAA-2;
P-l,CUFF.7751.1
         (2082 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73723 weakly similar to UniRef100_A7NYE4 Cluster: Chr...  1114   0.0  
gnl|LJGI|FS348230 weakly similar to UniRef100_A7NYE4 Cluster: Ch...   139   8e-32

>gnl|LJGI|TC73723 weakly similar to UniRef100_A7NYE4 Cluster: Chromosome chr6
            scaffold_3, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (11%)
          Length = 736

 Score = 1114 bits (562), Expect = 0.0
 Identities = 568/570 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1513 gggagtttcaaagcaacatttctgaataaaagaaagcgaagtgaaggaaatgattccaaa 1572
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    gggagtttcaaagcaacatttctgaataaaagaaagcgaagtgaaggaaatgattccaaa 60

                                                                        
Query: 1573 tgcaagacacaaaaacaggtaagggaggcatcaaggtcttatctggatctgaatatgcct 1632
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tgcaagacacaaaaacaggtaagggaggcatcaaggtcttatctggatctgaatatgcct 120

                                                                        
Query: 1633 ctagaggaggttgacgaggataataatgacagtgattgtgaaaatcaatccatggttgaa 1692
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  ctagaggaggttgacaaggataataatgacagtgattgtgaaaatcaatccatggttgaa 180

                                                                        
Query: 1693 aattctgaagcctggttaagtgatttctgtgatcaaattgatggagaagtggtttttaag 1752
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  aattctgaagcctggttaagtgatttctgtgatcaaattgatggagaagtggtttttaag 240

                                                                        
Query: 1753 ccattcaattttgattcccttgccgagcaagtaatagaatgtgttgagacacgatttcaa 1812
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  ccattcaattttgattcccttgccgagcaagtaatagaatgtgttgagacacgatttcaa 300

                                                                        
Query: 1813 aggacatttggatcagagtttctgctggaaattgattatgaggtcatggcacagatactt 1872
            ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 301  aggacatttggatcagagtttctactggaaattgattatgaggtcatggcacagatactt 360

                                                                        
Query: 1873 gcagctgcatggttatcggacaagaaaaaatctgtggaggattggattgagcatgttgtt 1932
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  gcagctgcatggttatcggacaagaaaaaatctgtggaggattggattgagcatgttgtt 420

                                                                        
Query: 1933 ggaagaagctttgccgaggcgcggcagaagtaccatcaccaccaccctgcagctgaatat 1992
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  ggaagaagctttgccgaggcgcggcagaagtaccatcaccaccaccctgcagctgaatat 480

                                                                        
Query: 1993 gtcatgaaactggttaactgtgaaagcatttttgtggaagagcaagctctaggagtgtgc 2052
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  gtcatgaaactggttaactgtgaaagcatttttgtggaagagcaagctctaggagtgtgc 540

                                          
Query: 2053 cttccagctagaattaacttaaactgaatt 2082
            ||||||||||||||||||||||||||||||
Sbjct: 541  cttccagctagaattaacttaaactgaatt 570


>gnl|LJGI|FS348230 weakly similar to UniRef100_A7NYE4 Cluster: Chromosome chr6
            scaffold_3, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (8%)
          Length = 707

 Score =  139 bits (70), Expect = 8e-32
 Identities = 181/218 (83%)
 Strand = Plus / Minus

                                                                        
Query: 1705 tggttaagtgatttctgtgatcaaattgatggagaagtggtttttaagccattcaatttt 1764
            |||||||||||||||||| ||||| |||||| | |||||| |||||||||||||||||||
Sbjct: 519  tggttaagtgatttctgtaatcaagttgatgaaaaagtggattttaagccattcaatttt 460

                                                                        
Query: 1765 gattcccttgccgagcaagtaatagaatgtgttgagacacgatttcaaaggacatttgga 1824
            |||   ||||| || ||| |  |  || |  ||   | || |||||||||||||||||| 
Sbjct: 459  gatgtgcttgctgaacaaatgttgaaaagcattagcatacaatttcaaaggacatttggt 400

                                                                        
Query: 1825 tcagagtttctgctggaaattgattatgaggtcatggcacagatacttgcagctgcatgg 1884
            |  ||||||| ||||||||||||||||||||| |||||||||||||| |||||||| |||
Sbjct: 399  tttgagtttcagctggaaattgattatgaggtaatggcacagatactcgcagctgcttgg 340

                                                  
Query: 1885 ttatcggacaagaaaaaatctgtggaggattggattga 1922
            ||| | || ||||||||  ||| |||||||||| ||||
Sbjct: 339  ttagcagagaagaaaaatgctgcggaggattgggttga 302