Miyakogusa Predicted Gene
- Lj0g3v0128559.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0128559.1 Non Chatacterized Hit- tr|I1NGB0|I1NGB0_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,25.94,4e-18,seg,NULL; domain in FBox and BRCT domain containing
pl,FBD; FBD,FBD; F-box,F-box domain, cyclin-like,CUFF.7750.1
(1542 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS326727 weakly similar to UniRef100_P0C2G1 Cluster: F-... 1174 0.0
gnl|LJGI|TC76855 weakly similar to UniRef100_Q71DY8 Cluster: NAD... 240 2e-62
gnl|LJGI|AV410724 similar to UniRef100_Q0D793 Cluster: Os07g0277... 196 3e-49
gnl|LJGI|TC73194 weakly similar to UniRef100_A7QK65 Cluster: Chr... 72 1e-11
>gnl|LJGI|FS326727 weakly similar to UniRef100_P0C2G1 Cluster: F-box/LRR-repeat
protein At3g58980; n=1; Arabidopsis thaliana|Rep:
F-box/LRR-repeat protein At3g58980 - Arabidopsis
thaliana (Mouse-ear cress), partial (8%)
Length = 631
Score = 1174 bits (592), Expect = 0.0
Identities = 592/592 (100%)
Strand = Plus / Plus
Query: 1 atgccccgtcagttggcggctccgccgtcgaccgtcgctcaatccaccgtcatgagtctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 atgccccgtcagttggcggctccgccgtcgaccgtcgctcaatccaccgtcatgagtctg 99
Query: 61 tcccggccctcttctacggcactctcccccatggggcaccttgcacattttcaacacaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 tcccggccctcttctacggcactctcccccatggggcaccttgcacattttcaacacaag 159
Query: 121 gaacttgctatgaagatggagtcaggttctgtttttattcctggtatttatgagaatcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 gaacttgctatgaagatggagtcaggttctgtttttattcctggtatttatgagaatcag 219
Query: 181 ctttcaaagaggcaaaaaatcaatgagggtcaagacattataagcaacctacctgacttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 ctttcaaagaggcaaaaaatcaatgagggtcaagacattataagcaacctacctgacttc 279
Query: 241 attattggtcatattctttcttttctttctgctaaagatgcagtccgtactagtgttctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 attattggtcatattctttcttttctttctgctaaagatgcagtccgtactagtgttctg 339
Query: 301 tctaaacgttggatatgcttgtggacctttatcaccaagctaaggtttggggatagagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tctaaacgttggatatgcttgtggacctttatcaccaagctaaggtttggggatagagat 399
Query: 361 cataattcttctccaaagaaaagtaaaagcagctttttaaactttgtgtatagagtactt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 cataattcttctccaaagaaaagtaaaagcagctttttaaactttgtgtatagagtactt 459
Query: 421 catcatctggatagttcaagcatagaaagtttttctcttactatatcagagaagtataat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 catcatctggatagttcaagcatagaaagtttttctcttactatatcagagaagtataat 519
Query: 481 gcttgtcatgtcagtaagtggatatcttctgctatagatcggagtgtcaaaaaggtcggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gcttgtcatgtcagtaagtggatatcttctgctatagatcggagtgtcaaaaaggtcggt 579
Query: 541 gtctattcacggaaagagttgaacctttccttccattcccttttcaaatgcc 592
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 gtctattcacggaaagagttgaacctttccttccattcccttttcaaatgcc 631
>gnl|LJGI|TC76855 weakly similar to UniRef100_Q71DY8 Cluster: NADH-ubiquinone
oxidoreductase chain 2; n=1; Leiosaurus bellii|Rep:
NADH-ubiquinone oxidoreductase chain 2 - Leiosaurus
bellii, partial (6%)
Length = 673
Score = 240 bits (121), Expect = 2e-62
Identities = 121/121 (100%)
Strand = Plus / Plus
Query: 1422 gaggctgagtgtttttccaacttggatgctgttcgggttgaatttggaaaatgctaaaga 1481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaggctgagtgtttttccaacttggatgctgttcgggttgaatttggaaaatgctaaaga 60
Query: 1482 aaagctcttctcatttagaaaaagttctaacttggcgattatagaaatttgcaccgtgta 1541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaagctcttctcatttagaaaaagttctaacttggcgattatagaaatttgcaccgtgta 120
Query: 1542 a 1542
|
Sbjct: 121 a 121
>gnl|LJGI|AV410724 similar to UniRef100_Q0D793 Cluster: Os07g0277400 protein; n=1; Oryza
sativa Japonica Group|Rep: Os07g0277400 protein - Oryza
sativa subsp. japonica (Rice), partial (6%)
Length = 175
Score = 196 bits (99), Expect = 3e-49
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 964 gacacccttgtgttagatctatctaaagcacatatcgcttctgctaaaattgtaccatac 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 gacacccttgtgttagatctatctaaagcacatatcgcttctgctaaaattgtaccatac 136
Query: 1024 aaatatgcggacgacactgtggaagagacagggattctt 1062
|||||||||||||||||||||||||||||||||||||||
Sbjct: 137 aaatatgcggacgacactgtggaagagacagggattctt 175
Score = 153 bits (77), Expect = 4e-36
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 171 tgagaatcagctttcaaagaggcaaaaaatcaatgagggtcaagacattataagcaacct 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgagaatcagctttcaaagaggcaaaaaatcaatgagggtcaagacattataagcaacct 60
Query: 231 acctgacttcattattg 247
|||||||||||||||||
Sbjct: 61 acctgacttcattattg 77
>gnl|LJGI|TC73194 weakly similar to UniRef100_A7QK65 Cluster: Chromosome chr19
scaffold_111, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_111, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (15%)
Length = 1713
Score = 71.9 bits (36), Expect = 1e-11
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 202 aatgagggtcaagacattataagcaacctacctgacttcattattggtcatattctttct 261
||||||| ||| ||||| ||||| ||||| |||||| |||||||||||| |||||||||
Sbjct: 223 aatgaggatcaggacatgataagtaacctccctgacgtcattattggtcgcattctttct 282
Query: 262 tttctttctgctaaagatgcagtc 285
||||| || | ||||||||||||
Sbjct: 283 cttcttcctaccaaagatgcagtc 306
Score = 56.0 bits (28), Expect = 7e-07
Identities = 84/102 (82%), Gaps = 3/102 (2%)
Strand = Plus / Plus
Query: 762 ccttagtttcccagttcttagaaagtatgagactaaaaattgcacttg---gtcagatgt 818
||||| |||||||||||| |||| ||| |||| |||| ||||||||| |||| |||
Sbjct: 756 ccttaatttcccagttctgagaacctataagacaaaaagttgcacttggttgtcaagtgt 815
Query: 819 gaagggtgtcactctagatgtgcctctgcttgaagtggtttc 860
|||| |||||||| |||| || ||||||||| |||| |||||
Sbjct: 816 gaagtgtgtcactttagaagtacctctgcttcaagtagtttc 857
Score = 56.0 bits (28), Expect = 7e-07
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 925 cgtcttacagaattcacttatattggttatatattaccagacacccttgtgttagatcta 984
||||||| |||||||| ||||||||||| | |||||||||| || |||||| ||||||
Sbjct: 928 cgtcttaaagaattcagttatattggttctccattaccagaccccactgtgtttgatcta 987
Query: 985 tctaaagcacatatcgcttctgct 1008
||| |||| || | |||||||||
Sbjct: 988 tctgcagcaaatgttgcttctgct 1011