Miyakogusa Predicted Gene
- Lj0g3v0128359.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0128359.1 Non Chatacterized Hit- tr|I1LA31|I1LA31_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,31.63,2e-16,Ran
BP2/NZF zinc finger-like,NULL; zf-RanBP,Zinc finger, RanBP2-type;
ZF_RANBP2_2,Zinc finger, RanBP,CUFF.7732.1
(1173 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61402 similar to UniRef100_A7PH81 Cluster: Chromosome... 1124 0.0
gnl|LJGI|TC76997 weakly similar to UniRef100_A7PH81 Cluster: Chr... 474 e-133
gnl|LJGI|AV773398 similar to UniRef100_A7PH81 Cluster: Chromosom... 129 4e-29
>gnl|LJGI|TC61402 similar to UniRef100_A7PH81 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 834
Score = 1124 bits (567), Expect = 0.0
Identities = 567/567 (100%)
Strand = Plus / Plus
Query: 170 aagaaatcacaccctccgccgcctcctccgaccaactccatccctggcccgaatgggtct 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 aagaaatcacaccctccgccgcctcctccgaccaactccatccctggcccgaatgggtct 327
Query: 230 ccttcatcgaccgcttgaacaccaaaggttacttcaccaaaccccgtccttccgatggca 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ccttcatcgaccgcttgaacaccaaaggttacttcaccaaaccccgtccttccgatggca 387
Query: 290 ctgtttacgtcaacgtcaacctcttgaaggacgcttgtctcagctttggacgtgaccgtt 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ctgtttacgtcaacgtcaacctcttgaaggacgcttgtctcagctttggacgtgaccgtt 447
Query: 350 acgacattttcaaattgctgccagtggaagatattcaagcaattgtggagggagggtgcc 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 acgacattttcaaattgctgccagtggaagatattcaagcaattgtggagggagggtgcc 507
Query: 410 ctaatcttctccgtaaagctgttaattcagctaaaaggctgagagctcacctgaaattag 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ctaatcttctccgtaaagctgttaattcagctaaaaggctgagagctcacctgaaattag 567
Query: 470 aggaagccgatgtttgtagtgcttgtagtctccgaggttcttgtgatagagcttatgtga 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 aggaagccgatgtttgtagtgcttgtagtctccgaggttcttgtgatagagcttatgtga 627
Query: 530 ctctaaatgaatttgaagctgatgctcgaactgtggatatagtacgaatactattgttct 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ctctaaatgaatttgaagctgatgctcgaactgtggatatagtacgaatactattgttct 687
Query: 590 acgcgatagatccacttgtttttaacggaggagagaaacagccaggccgagaagttattg 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 acgcgatagatccacttgtttttaacggaggagagaaacagccaggccgagaagttattg 747
Query: 650 actcctctgtaagaaaacttctgtctcagctgattgagctgagcgagacgtccactgctc 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 actcctctgtaagaaaacttctgtctcagctgattgagctgagcgagacgtccactgctc 807
Query: 710 ctcctcctgctcctgctcctgttcgtt 736
|||||||||||||||||||||||||||
Sbjct: 808 ctcctcctgctcctgctcctgttcgtt 834
Score = 198 bits (100), Expect = 6e-50
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 1 atgtcaagttcaaagctggcactgtacggcatcggaaccgcactgttccgaacctctcga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 atgtcaagttcaaagctggcactgtacggcatcggaaccgcactgttccgaacctctcga 158
Query: 61 accataactaccaactctccatttctctccttcaaaccca 100
||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 accataactaccaactctccatttctctccttcaaaccca 198
>gnl|LJGI|TC76997 weakly similar to UniRef100_A7PH81 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (23%)
Length = 615
Score = 474 bits (239), Expect = e-133
Identities = 239/239 (100%)
Strand = Plus / Plus
Query: 933 gaagcaaggcgattggatctgtcctgaatgtaattttttaaatttttccagaaacaaaca 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaagcaaggcgattggatctgtcctgaatgtaattttttaaatttttccagaaacaaaca 60
Query: 993 gtgtctaaaatgcaaaacagaggggccagagagggtcaatttaggcgtagttgaaatgaa 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgtctaaaatgcaaaacagaggggccagagagggtcaatttaggcgtagttgaaatgaa 120
Query: 1053 aaaaggagattggacttgcccaaagtgtgagttcaagaactatgccagtaatgttaagtg 1112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaaggagattggacttgcccaaagtgtgagttcaagaactatgccagtaatgttaagtg 180
Query: 1113 tttgcgttgccccgagccaagacccaagaaaaatgctggcgattggaattgtcccaagt 1171
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttgcgttgccccgagccaagacccaagaaaaatgctggcgattggaattgtcccaagt 239
>gnl|LJGI|AV773398 similar to UniRef100_A7PH81 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 471
Score = 129 bits (65), Expect = 4e-29
Identities = 83/89 (93%)
Strand = Plus / Minus
Query: 1079 gtgagttcaagaactatgccagtaatgttaagtgtttgcgttgccccgagccaagaccca 1138
|||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||
Sbjct: 471 gtgagttcaagaactatgcccgtcatgttaagtgtttgcgttgccccgagcccagacccc 412
Query: 1139 agaaaaatgctggcgattggaattgtccc 1167
|| |||||||||||||||||||||||||
Sbjct: 411 agccaaatgctggcgattggaattgtccc 383