Miyakogusa Predicted Gene

Lj0g3v0128249.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0128249.1 tr|H9BZ74|H9BZ74_BIGNA Tic40 OS=Bigelowiella
natans PE=2 SV=1,35,4e-18,seg,NULL; Heat shock chaperonin-binding
motif.,Heat shock chaperonin-binding; UCH37_bd,NULL;
OS12G06,CUFF.7736.1
         (918 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60782 similar to UniRef100_A7PQB3 Cluster: Chromosome...   890   0.0  
gnl|LJGI|TC57727 similar to UniRef100_Q8GT66 Cluster: Chloroplas...   448   e-125

>gnl|LJGI|TC60782 similar to UniRef100_A7PQB3 Cluster: Chromosome chr18 scaffold_24,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_24, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (34%)
          Length = 868

 Score =  890 bits (449), Expect = 0.0
 Identities = 449/449 (100%)
 Strand = Plus / Plus

                                                                       
Query: 470 ctgtggatgctttggagaaaatgatggatgacccaacggtgcagaagatggtttttccct 529
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ctgtggatgctttggagaaaatgatggatgacccaacggtgcagaagatggtttttccct 60

                                                                       
Query: 530 atttacctgaggagatgaggaaccctactaccttcaaatggatgttgcagaatcctcagt 589
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  atttacctgaggagatgaggaaccctactaccttcaaatggatgttgcagaatcctcagt 120

                                                                       
Query: 590 atcgtcaacaacttgaagaaatgctaaacaacatgggtggaagcactgaatgggacggcc 649
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcgtcaacaacttgaagaaatgctaaacaacatgggtggaagcactgaatgggacggcc 180

                                                                       
Query: 650 aaatgatggacaccttaaaaaactttgaccttaatagtcctgaagttaagcaacaatttg 709
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaatgatggacaccttaaaaaactttgaccttaatagtcctgaagttaagcaacaatttg 240

                                                                       
Query: 710 atcaaattgggctttctccagaagaagttatttcaaagattatggccaatcctgatgttg 769
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atcaaattgggctttctccagaagaagttatttcaaagattatggccaatcctgatgttg 300

                                                                       
Query: 770 caatggcatttcaaaatccaagagtacaagcagccatcatggattgttcacagaatccac 829
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caatggcatttcaaaatccaagagtacaagcagccatcatggattgttcacagaatccac 360

                                                                       
Query: 830 tgaatattgccaaatatcaaaatgataaggaggttatggatgtcttcaacaaaatatcag 889
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgaatattgccaaatatcaaaatgataaggaggttatggatgtcttcaacaaaatatcag 420

                                        
Query: 890 aactcttccctggagtgtcaggctgacca 918
           |||||||||||||||||||||||||||||
Sbjct: 421 aactcttccctggagtgtcaggctgacca 449


>gnl|LJGI|TC57727 similar to UniRef100_Q8GT66 Cluster: Chloroplast protein translocon
           component Tic40; n=1; Pisum sativum|Rep: Chloroplast
           protein translocon component Tic40 - Pisum sativum
           (Garden pea), partial (42%)
          Length = 862

 Score =  448 bits (226), Expect = e-125
 Identities = 233/234 (99%), Gaps = 1/234 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcaacaagctttcaagactatgatgggcgggatgaattcacaaagtaaccaattcaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 atgcaacaagctttcaagactatgatgggcgggatgaattcacaaagtaaccaattcaac 688

                                                                       
Query: 61  agtgctgccttttctcctggatctccttttccctttcctatgccttcgccaccagggcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 agtgctgccttttctcctggatctccttttccctttcctatgccttcgccaccagggcct 748

                                                                       
Query: 121 actgcaccggctaattctttcggtactcaatctcgtgcaccatccacaccaagtgcttct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 actgcaccggctaattctttcggtactcaatctcgtgcaccatccacaccaagtgcttct 808

                                                                 
Query: 181 caatctactattacagtagatatacctccgacaaaagtagaagcagccccagcc 234
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 809 caatctactattacagtagatatacctccgac-aaagtagaagcagccccagcc 861