Miyakogusa Predicted Gene

Lj0g3v0128189.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0128189.1 CUFF.7714.1
         (441 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC82716 similar to UniRef100_A7Q1H4 Cluster: Chromosome...   100   1e-20
gnl|LJGI|TC70453 similar to UniRef100_A7Q1H4 Cluster: Chromosome...    60   1e-08

>gnl|LJGI|TC82716 similar to UniRef100_A7Q1H4 Cluster: Chromosome chr7 scaffold_44,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_44, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (91%)
          Length = 1314

 Score = 99.6 bits (50), Expect = 1e-20
 Identities = 161/198 (81%)
 Strand = Plus / Plus

                                                                       
Query: 83  ttgatgcagaaaggccaagggaagggttggatgatctccttaaagtagctgattatgttg 142
           ||||||| ||||||||||||||||||||| |||| |||||  || | |||||||||||||
Sbjct: 564 ttgatgctgaaaggccaagggaagggttgaatgacctcctggaattggctgattatgttg 623

                                                                       
Query: 143 tatgctcagcgaagtttcccaccgcgtggacagaggcatcaactattccacaagcacttg 202
           ||||||||| ||| |||||    || ||||||| ||||||| ||||||||  |||||| |
Sbjct: 624 tatgctcagagaaatttccagaggcctggacaggggcatcatctattccaagagcactag 683

                                                                       
Query: 203 tttctatgcttttaaggttgcccaaaatcaaatttgtgatagtaactttgggaaaagacg 262
           | || ||  |||||||| |||| |   | |||||||| || | |||||||||| || | |
Sbjct: 684 tatcaattattttaaggctgccaagggttaaatttgtcattgcaactttgggagaaaatg 743

                             
Query: 263 gttgtataatgctcgaga 280
           | ||||||||||| ||||
Sbjct: 744 gctgtataatgcttgaga 761


>gnl|LJGI|TC70453 similar to UniRef100_A7Q1H4 Cluster: Chromosome chr7 scaffold_44,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_44, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (26%)
          Length = 599

 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 358 agtacatcgattcctgcttgcatatcatca 387
           ||||||||||||||||||||||||||||||
Sbjct: 1   agtacatcgattcctgcttgcatatcatca 30