Miyakogusa Predicted Gene

Lj0g3v0127959.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0127959.1 Non Chatacterized Hit- tr|H3GLQ3|H3GLQ3_PHYRM
Uncharacterized protein OS=Phytophthora ramorum
GN=fge,37.27,5e-17,FORMIN-RELATED,NULL; FH2,Actin-binding FH2; Formin
homology 2 domain (FH2 domain),Actin-binding FH2,CUFF.7700.1
         (339 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS338018 similar to UniRef100_A7PDI0 Cluster: Chromosom...   672   0.0  

>gnl|LJGI|FS338018 similar to UniRef100_A7PDI0 Cluster: Chromosome chr17 scaffold_12,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_12, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (25%)
          Length = 794

 Score =  672 bits (339), Expect = 0.0
 Identities = 339/339 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaagtgcctcgagtggaatcaaaattaagagtttttgctttcaagattcagtacggt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11  atgaaagtgcctcgagtggaatcaaaattaagagtttttgctttcaagattcagtacggt 70

                                                                       
Query: 61  tgtcagattacagagtttaagaggagtttaaacacggtgaactctgcctgtgaagaggtc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71  tgtcagattacagagtttaagaggagtttaaacacggtgaactctgcctgtgaagaggtc 130

                                                                       
Query: 121 cgcaattcgctaaaactgaaggagattatgaagaaaattctttatttgggtaatacatta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 cgcaattcgctaaaactgaaggagattatgaagaaaattctttatttgggtaatacatta 190

                                                                       
Query: 181 aatcaaggaacagcaaggggatctgctgttggattcaagttggaaagtcttttaaagctc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 aatcaaggaacagcaaggggatctgctgttggattcaagttggaaagtcttttaaagctc 250

                                                                       
Query: 241 actgatactcgtgcttctaacagtagaatgacactgatgcattatctttgcaaggtccta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 actgatactcgtgcttctaacagtagaatgacactgatgcattatctttgcaaggtccta 310

                                                  
Query: 301 gccgaaaagtctcctggactccttgattttcacctgggc 339
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gccgaaaagtctcctggactccttgattttcacctgggc 349