Miyakogusa Predicted Gene

Lj0g3v0127559.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0127559.1 Non Chatacterized Hit- tr|I1K261|I1K261_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,66.3,0,DUF4413,Domain of unknown function DUF4413; seg,NULL;
Ribonuclease H-like,Ribonuclease H-like domain,gene.g9750.t1.1
         (1213 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76484 weakly similar to UniRef100_Q9LS83 Cluster: Sim...   161   1e-38

>gnl|LJGI|TC76484 weakly similar to UniRef100_Q9LS83 Cluster: Similarity to Ac-like
           transposase; n=1; Arabidopsis thaliana|Rep: Similarity
           to Ac-like transposase - Arabidopsis thaliana (Mouse-ear
           cress), partial (6%)
          Length = 882

 Score =  161 bits (81), Expect = 1e-38
 Identities = 207/249 (83%)
 Strand = Plus / Plus

                                                                       
Query: 327 tttcaatattcgtgaaagtatggagtatattaactacaatgatgcaaggttgaagacatt 386
           ||||||| ||||||||||| |  | || || ||||||||||||||||| || ||||  ||
Sbjct: 1   tttcaatgttcgtgaaagtgtaaaatacatcaactacaatgatgcaagattaaagaactt 60

                                                                       
Query: 387 ttgtgatgttgttgaacagaagcgcttgggagttagaaaacttcttattgattgtccaac 446
           ||||||||| |||||||||||||| |||  ||  || || ||| | || ||||| |||||
Sbjct: 61  ttgtgatgtggttgaacagaagcgtttgaaagagaggaagcttatcatggattgcccaac 120

                                                                       
Query: 447 aagatggaataccacatttcatatgttgacagctgcattgaaatttaaaattgcctttgc 506
           |||||||||| | ||||||| ||||||| || |||| |||||||| || | ||| |||| 
Sbjct: 121 aagatggaattcaacatttcgtatgttggcaactgctttgaaattcaagactgcatttga 180

                                                                       
Query: 507 agcttacaaagaaagagagccccattatgattatgcaccttcacttgaagattgggacaa 566
            |||||||| |||||||||||||||||||||||| ||||||||  ||||||||||  |||
Sbjct: 181 tgcttacaaggaaagagagccccattatgattatacaccttcatctgaagattggagcaa 240

                    
Query: 567 ggttgagaa 575
            ||||||||
Sbjct: 241 agttgagaa 249