Miyakogusa Predicted Gene
- Lj0g3v0127549.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0127549.1 CUFF.7678.1
(1408 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75522 similar to UniRef100_A7PM36 Cluster: Chromosome... 1302 0.0
gnl|LJGI|TC78915 weakly similar to UniRef100_A7PM36 Cluster: Chr... 444 e-124
gnl|LJGI|TC82540 weakly similar to UniRef100_A7PM36 Cluster: Chr... 440 e-122
>gnl|LJGI|TC75522 similar to UniRef100_A7PM36 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 681
Score = 1302 bits (657), Expect = 0.0
Identities = 671/678 (98%)
Strand = Plus / Plus
Query: 501 tggggtgtgggagagtgatgatgttgatgctgaattggggttggagagtctctgctttgt 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggggtgtgggagagtgatgatgttgatgctgaattggggttggagagtctctgctttgt 60
Query: 561 gggtatccgtggtgatgattggggtttgggttggttgtggaaaagttgcaggaagctgaa 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gggtatccgtggtgatgattggggtttgggttggttgtggaaaagttgcaggaagctgaa 120
Query: 621 gaaattgaggcttcaaagttgtcaagggattggtgggtcttactcttgttttgttcagtg 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaaattgaggcttcaaagttgtcaagggattggtgggtcttactcttgttttgttcagtg 180
Query: 681 cctgcaaggtgttcgagaaattgagctcagaacttgcaggagtgtggttgatggggttct 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cctgcaaggtgttcgagaaattgagctcagaacttgcaggagtgtggttgatggggttct 240
Query: 741 gttgaaacttgcagaaaactctcactctttgaattctctgttggttcatgatggaggtag 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gttgaaacttgcagaaaactctcactctttgaattctctgttggttcatgatggaggtag 300
Query: 801 cagggagggtttgcttcacnnnnnnnctcagtgcaggtctaatctgcagaggcttgatct 860
||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 301 cagggagggtttgcttcactttttttctcagtgcaggtctaatctgcagaggcttgatct 360
Query: 861 tcgtttacctttggaccttgataacaatcatctttcggctgtggcggttaattttagaaa 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcgtttacctttggaccttgataacaatcatctttcggctgtggcggttaattttagaaa 420
Query: 921 cctctcgagtctcaggcttcagagttgttgtcttgtcactggggaaggcttgaaggcgat 980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cctctcgagtctcaggcttcagagttgttgtcttgtcactggggaaggcttgaaggcgat 480
Query: 981 agcgatagcgacgagtaacgggcttgaagaattggcgctgataaactgcgatgtggttga 1040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agcgatagcgacgagtaacgggcttgaagaattggcgctgataaactgcgatgtggttga 540
Query: 1041 aagagaacctggattgcttgccactttggggcagcatttgaggcaattgaggaaactaga 1100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aagagaacctggattgcttgccactttggggcagcatttgaggcaattgaggaaactaga 600
Query: 1101 cttgtcacacaatgaaatgttgcttgataaagagctcatttcgatgttggtttcttgcgt 1160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cttgtcacacaatgaaatgttgcttgataaagagctcatttcgatgttggtttcttgcgt 660
Query: 1161 gaatttgattgatttgag 1178
||||||||||||||||||
Sbjct: 661 gaatttgattgatttgag 678
>gnl|LJGI|TC78915 weakly similar to UniRef100_A7PM36 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 459
Score = 444 bits (224), Expect = e-124
Identities = 224/224 (100%)
Strand = Plus / Plus
Query: 1185 agggtgtaaaggaatcactagtgctgccatggtttctatgctcaggagctgcaaacgctt 1244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agggtgtaaaggaatcactagtgctgccatggtttctatgctcaggagctgcaaacgctt 60
Query: 1245 ggaaaatgtagatatgatgcagtgtttgggcatagaatctgaggctattgaactgtttgt 1304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggaaaatgtagatatgatgcagtgtttgggcatagaatctgaggctattgaactgtttgt 120
Query: 1305 taagaactcttctcgtttgagaaggatggaggttgaggaaagcaagctttctgatgctgc 1364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taagaactcttctcgtttgagaaggatggaggttgaggaaagcaagctttctgatgctgc 180
Query: 1365 aaaaatgtgggcatcaaataaattcattgaagttgttgtttaat 1408
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaaaatgtgggcatcaaataaattcattgaagttgttgtttaat 224
>gnl|LJGI|TC82540 weakly similar to UniRef100_A7PM36 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 708
Score = 440 bits (222), Expect = e-122
Identities = 222/222 (100%)
Strand = Plus / Plus
Query: 258 cgctgtttcctcttgctgttcccagcttcgtgctctcagattcttaaccggccctgtttc 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 cgctgtttcctcttgctgttcccagcttcgtgctctcagattcttaaccggccctgtttc 546
Query: 318 tcttcgttccatcaattcgcttgccaattcttgtacccatttgagctctctgtgtattag 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tcttcgttccatcaattcgcttgccaattcttgtacccatttgagctctctgtgtattag 606
Query: 378 tctctccaggccaatttttctcaggtgggtgttggaatttccctgcttgaaagatttgtc 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 tctctccaggccaatttttctcaggtgggtgttggaatttccctgcttgaaagatttgtc 666
Query: 438 aattgttctctgctccggtgatgaaaatggaagctcccatga 479
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 aattgttctctgctccggtgatgaaaatggaagctcccatga 708
Score = 141 bits (71), Expect = 1e-32
Identities = 117/140 (83%)
Strand = Plus / Plus
Query: 1 atggacaacgttctctgtgatgaactcttacaagaaattttccaaaaactccctnnnnnn 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 atggacaacgttctctgtgatgaactcttacaagaaattttccaaaaactcccttcatca 265
Query: 61 nnnnnnnnnnnnnnnnnccttgtttccaagcggtggctccacctcttccgttcctccaga 120
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tcatcatcatcctcatcccttgtttccaagcggtggctccacctcttccgttcctccaga 325
Query: 121 accaccctctctctccgtat 140
||||||||||||||||||||
Sbjct: 326 accaccctctctctccgtat 345