Miyakogusa Predicted Gene
- Lj0g3v0127499.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0127499.1 tr|G7LBE0|G7LBE0_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_8g1,72.22,2e-18,seg,NULL; Myosin_HC-like,Myosin II heavy
chain-like; coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL;
FAM,CUFF.7674.1
(1731 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW622456 homologue to UniRef100_A7P3V5 Cluster: Chromos... 98 2e-19
gnl|LJGI|AU089041 similar to UniRef100_A7P3V5 Cluster: Chromosom... 68 2e-10
gnl|LJGI|TC68555 homologue to UniRef100_A7P3V5 Cluster: Chromoso... 66 8e-10
gnl|LJGI|TC71590 similar to UniRef100_A7P3V5 Cluster: Chromosome... 58 2e-07
gnl|LJGI|TC68681 similar to UniRef100_A7P3V5 Cluster: Chromosome... 54 3e-06
>gnl|LJGI|BW622456 homologue to UniRef100_A7P3V5 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (25%)
Length = 493
Score = 97.6 bits (49), Expect = 2e-19
Identities = 292/373 (78%)
Strand = Plus / Plus
Query: 686 tggacaaaatgcatcgcctaaaggttactgaagttgaaaagctaacccaaactgttcgtg 745
|||||||||||||| | |||||||| | || ||||||||||| ||||||||||| | |
Sbjct: 15 tggacaaaatgcatagactaaaggtggcagaggttgaaaagctcacccaaactgtaagag 74
Query: 746 aacttgaagaggctgtcttggcaggtggtgctgctgctaatgctgtccgtgattaccagc 805
| || |||||| ||||| | |||||||| || ||||||||||| || | ||||| ||||
Sbjct: 75 agctggaagagactgtccttgcaggtggggcagctgctaatgcagtgagagattatcagc 134
Query: 806 gccaagtgcaagagatgaatgaggaaaggaaagttttggagcgggaagtagctcgtgcta 865
| |||| ||||| |||||||| ||||| ||| | | || |||| | || ||||| |
Sbjct: 135 ggaaagttcaagaaatgaatgaagaaagaaaaactcttgacagggagttggcccgtgcca 194
Query: 866 aagttactgcaaacagggttgccactgtagttgcgaatgagtggaaagatgctaacgaca 925
| || || |||||||| || || ||| ||||| ||||| |||||||||||||| || |
Sbjct: 195 aggtaaccgcaaacagagtagctgttgtggttgcaaatgaatggaaagatgctaatgata 254
Query: 926 aagtgatgcctgtaaagcattggctagaagaaagaaaagttttccagggtgaaatgcaac 985
||||||||||||| || || ||||| |||||| | | | || ||||| |||||||| |
Sbjct: 255 aagtgatgcctgtcaaacaatggcttgaagaacgtcgattcttgcagggggaaatgcagc 314
Query: 986 aactacgagataaattgactgtagctgagcgcactgcaaaagcagaagcacaaatgaagg 1045
|||| || || || | || ||| ||||||||||||||| | ||||| || |||| |
Sbjct: 315 aacttcgtgacaagcttgctatagttgagcgcactgcaaagtctgaagcgcagttgaaag 374
Query: 1046 aaaaatatcaatt 1058
|||||||||||||
Sbjct: 375 aaaaatatcaatt 387
>gnl|LJGI|AU089041 similar to UniRef100_A7P3V5 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (15%)
Length = 416
Score = 67.9 bits (34), Expect = 2e-10
Identities = 127/158 (80%)
Strand = Plus / Plus
Query: 901 aatgagtggaaagatgctaacgacaaagtgatgcctgtaaagcattggctagaagaaaga 960
||||| |||||||||||||| || |||||||||||||| || || ||||| |||||| ||
Sbjct: 81 aatgaatggaaagatgctaatgataaagtgatgcctgtcaaacaatggcttgaagaacga 140
Query: 961 aaagttttccagggtgaaatgcaacaactacgagataaattgactgtagctgagcgcact 1020
| | || ||||| || ||||| ||||| |||||||| | || |||||||||| |||
Sbjct: 141 cgattcttacagggagagatgcagcaacttcgagataagcttgctatagctgagcgtact 200
Query: 1021 gcaaaagcagaagcacaaatgaaggaaaaatatcaatt 1058
|||| | |||||||| | || ||||||||||||||
Sbjct: 201 tcaaagtccgaagcacagttaaaagaaaaatatcaatt 238
>gnl|LJGI|TC68555 homologue to UniRef100_A7P3V5 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 689
Score = 65.9 bits (33), Expect = 8e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 371 tggctgcacaatttgctgcagaagctacacttagaagggtccatgctgctcagaaagacg 430
||||||| || ||||| || ||||| || ||| |||||||||||||||||||||| || |
Sbjct: 547 tggctgctcagtttgcagctgaagccactcttcgaagggtccatgctgctcagaaggatg 606
Query: 431 atgaaatgcctcc 443
|||| ||||||||
Sbjct: 607 atgacatgcctcc 619
>gnl|LJGI|TC71590 similar to UniRef100_A7P3V5 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (9%)
Length = 622
Score = 58.0 bits (29), Expect = 2e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1594 agggaagtagcttccatggaaaaggaggttgctgctctgcg 1634
||||||||||| ||||||||||||||||| |||||| ||||
Sbjct: 15 agggaagtagcctccatggaaaaggaggtagctgctatgcg 55
>gnl|LJGI|TC68681 similar to UniRef100_A7P3V5 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (6%)
Length = 836
Score = 54.0 bits (27), Expect = 3e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1594 agggaagtagcttccatggaaaaggaggttgctgc 1628
|||||||||||||||||||| |||||||| |||||
Sbjct: 7 agggaagtagcttccatggagaaggaggtagctgc 41