Miyakogusa Predicted Gene

Lj0g3v0127239.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0127239.1 Non Chatacterized Hit- tr|Q6Z2Y3|Q6Z2Y3_ORYSJ
Putative uncharacterized protein OJ1008_C03.26-2
OS=Or,73.08,6e-16,seg,NULL,CUFF.7659.1
         (984 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW596673                                                      60   3e-08
gnl|LJGI|TC68018 similar to UniRef100_A7P7G9 Cluster: Chromosome...    60   3e-08

>gnl|LJGI|BW596673 
          Length = 511

 Score = 60.0 bits (30), Expect = 3e-08
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                         
Query: 1   atgagcagttcaagggaaagctccccagattggttgcgttcttttc 46
           |||||||| |||||||||| ||| |||||||||||| |||||||||
Sbjct: 429 atgagcagctcaagggaaaactcgccagattggttgtgttcttttc 474


>gnl|LJGI|TC68018 similar to UniRef100_A7P7G9 Cluster: Chromosome chr9 scaffold_7,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr9 scaffold_7, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (10%)
          Length = 1012

 Score = 60.0 bits (30), Expect = 3e-08
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                         
Query: 1   atgagcagttcaagggaaagctccccagattggttgcgttcttttc 46
           |||||||| |||||||||| ||| |||||||||||| |||||||||
Sbjct: 205 atgagcagctcaagggaaaactcgccagattggttgtgttcttttc 250