Miyakogusa Predicted Gene

Lj0g3v0126949.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0126949.1 Non Chatacterized Hit- tr|I1M638|I1M638_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,83.19,0,NIEMANN-PICK C1,NULL; PATCHED-RELATED,NULL;
seg,NULL,CUFF.7666.1
         (1746 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58016 similar to UniRef100_A7QPC0 Cluster: Chromosome...    54   3e-06

>gnl|LJGI|TC58016 similar to UniRef100_A7QPC0 Cluster: Chromosome chr18 scaffold_137,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_137, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (14%)
          Length = 794

 Score = 54.0 bits (27), Expect = 3e-06
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 358 aatcttttctgtgaactttcttgctctcccaatcagagtctcttcatcaatgtcacttc 416
           ||||| |||||||| ||| | |||||||| ||||||||| | ||||||||||| |||||
Sbjct: 483 aatctgttctgtgagcttacatgctctccaaatcagagtttattcatcaatgtgacttc 541