Miyakogusa Predicted Gene

Lj0g3v0126879.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0126879.1 Non Chatacterized Hit- tr|I3SQ61|I3SQ61_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,86.61,0,coiled-coil,NULL; 60S RIBOSOMAL PROTEIN L30-LIKE
PROTEIN,NULL; 60S RIBOSOMAL PROTEIN L24,Ribosomal p,CUFF.7632.1
         (405 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78494 similar to UniRef100_A7PPI9 Cluster: Chromosome...   666   0.0  
gnl|LJGI|TC58873 similar to UniRef100_A7PPI9 Cluster: Chromosome...   557   e-158

>gnl|LJGI|TC78494 similar to UniRef100_A7PPI9 Cluster: Chromosome chr8 scaffold_23,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr8 scaffold_23, whole genome shotgun
            sequence - Vitis vinifera (Grape), complete
          Length = 1864

 Score =  666 bits (336), Expect = 0.0
 Identities = 377/395 (95%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgctggttttgttcttcaactgtattcccggctctggacatggaatccagtttgtccgt 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970  atgctggttttgttcttcaactgtattcccggctctggacatggaatccagtttgtccgt 1029

                                                                        
Query: 61   aatgatgcgaagatttttcggttctatagatccaaatgccacaagaactttaaaatgaag 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1030 aatgatgcgaagatttttcggttctatagatccaaatgccacaagaactttaaaatgaag 1089

                                                                        
Query: 121  aggaatcctcgtaaagtaaaatggaccaaggcatataggcgagtgcatggaaaggagatg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1090 aggaatcctcgtaaagtaaaatggaccaaggcatataggcgagtgcatggaaaggagatg 1149

                                                                        
Query: 181  acaaggattcaaacctttgagtttgagagaaagcgaaataggcctgagagatatgacagg 240
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1150 acaaggattcaaacctttgagtttgagagaaagcgaaatagacctgagagatatgacagg 1209

                                                                        
Query: 241  aatgttaaggaggatgtcctcaaggccattcctaagattgctaagatcaaagccagcagg 300
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||
Sbjct: 1210 aatgttaaggaggatgtcctcaaggccattcctaagattgctaagatcagagctatcagg 1269

                                                                        
Query: 301  gaggagacacaccataagaaaatgaagcaaggnnnnnnnnnnnnncagcggagggaggca 360
            ||||||||||||||||||||||||||||||||             | |||||||||||||
Sbjct: 1270 gaggagacacaccataagaaaatgaagcaaggcaaacatgaaaaactgcggagggaggca 1329

                                               
Query: 361  gaaaaggagttgaagcagggcatcaacatggtcaa 395
            |||||||||||||||||||||||||||||||||||
Sbjct: 1330 gaaaaggagttgaagcagggcatcaacatggtcaa 1364


>gnl|LJGI|TC58873 similar to UniRef100_A7PPI9 Cluster: Chromosome chr8 scaffold_23,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_23, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (64%)
          Length = 850

 Score =  557 bits (281), Expect = e-158
 Identities = 366/396 (92%), Gaps = 7/396 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgctggttttgttcttcaactgtattcccggctctggacatggaatccagtttgtccgt 60
           ||||||||||||||||||||| |||| ||     ||||||||||||||||||||||||||
Sbjct: 169 atgctggttttgttcttcaaccgtatacc-----ctggacatggaatccagtttgtccgt 223

                                                                       
Query: 61  aatgatgcgaagatttttcggttctatagatccaaatgccacaagaactttaaaatgaag 120
           |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 224 aatgatgccaagatttttcggttctgtagatccaaatgccacaagaactttaaaatgaag 283

                                                                       
Query: 121 aggaatcctcgtaaagtaaaatggaccaaggcatataggcgagtgcatggaaaggagatg 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 284 aggaatcctcgtaaagtaaaatggaccaaggcatataggcgagtgcatggaaaggatatg 343

                                                                       
Query: 181 ac-aaggattcaaacctttgagtttgagagaaagcgaaataggcctgagagatatgacag 239
           || |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 344 acaaaggattc-aacctttgagtttgagagaaagcgaaatagacctgagagatatgacag 402

                                                                       
Query: 240 gaatgttaaggaggatgtcctcaaggccattcctaagattgctaagatcaaagccagcag 299
           |||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||
Sbjct: 403 gaatgttaaggaggatgtcctcaaggccattcctaagattgctaagatcagagctatcag 462

                                                                       
Query: 300 ggaggagacacaccataagaaaatgaagcaaggnnnnnnnnnnnnncagcggagggaggc 359
           |||||||||||||||||||||||||||||||||             | ||||||||||||
Sbjct: 463 ggaggagacacaccataagaaaatgaagcaaggcaaacatgaaaaactgcggagggaggc 522

                                               
Query: 360 agaaaaggagttgaagcagggcatcaacatggtcaa 395
           ||||||||||||||||||||||||||||||||||||
Sbjct: 523 agaaaaggagttgaagcagggcatcaacatggtcaa 558