Miyakogusa Predicted Gene

Lj0g3v0126049.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0126049.1 Non Chatacterized Hit- tr|I1KP78|I1KP78_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19091 PE,84.94,0,P-loop
containing nucleoside triphosphate hydrolases,NULL;
HELICASE_ATP_BIND_1,Helicase, superfamily,CUFF.7630.1
         (1371 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71902 similar to UniRef100_A7QKJ8 Cluster: Chromosome...   735   0.0  
gnl|LJGI|AV778668 similar to UniRef100_Q6K7R9 Cluster: DEAD-box ...   232   5e-60
gnl|LJGI|AV767433 homologue to UniRef100_A7PZU7 Cluster: Chromos...    56   6e-07

>gnl|LJGI|TC71902 similar to UniRef100_A7QKJ8 Cluster: Chromosome chr2 scaffold_112,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr2 scaffold_112, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (16%)
          Length = 607

 Score =  735 bits (371), Expect = 0.0
 Identities = 371/371 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1001 gaagaacagggcgggaaggcaaagaaggggaaggcatattgttgattgctccatgggaag 1060
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    gaagaacagggcgggaaggcaaagaaggggaaggcatattgttgattgctccatgggaag 60

                                                                        
Query: 1061 aatattttttagatgaaatcaaggatctccctctaaagaaaatccccttaccagatatag 1120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   aatattttttagatgaaatcaaggatctccctctaaagaaaatccccttaccagatatag 120

                                                                        
Query: 1121 atccacaggcaaagctcaagattgagcattcaatggaaaagattgatgatgatattaaag 1180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  atccacaggcaaagctcaagattgagcattcaatggaaaagattgatgatgatattaaag 180

                                                                        
Query: 1181 aagcagcatatcatggttggcttggttattataactccatcagggaaatcgggagggaga 1240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  aagcagcatatcatggttggcttggttattataactccatcagggaaatcgggagggaga 240

                                                                        
Query: 1241 agacaactattgctgacctggcgaaccgattttcagaatcaattggtttacagagacctc 1300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  agacaactattgctgacctggcgaaccgattttcagaatcaattggtttacagagacctc 300

                                                                        
Query: 1301 ctgctctcttccgaaaaactgcacttaaaatgggtttgaaggacattcctggcattagaa 1360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  ctgctctcttccgaaaaactgcacttaaaatgggtttgaaggacattcctggcattagaa 360

                       
Query: 1361 ttcgtagatag 1371
            |||||||||||
Sbjct: 361  ttcgtagatag 371


>gnl|LJGI|AV778668 similar to UniRef100_Q6K7R9 Cluster: DEAD-box ATP-dependent RNA
            helicase 48; n=1; Oryza sativa Japonica Group|Rep:
            DEAD-box ATP-dependent RNA helicase 48 - Oryza sativa
            subsp. japonica (Rice), partial (5%)
          Length = 445

 Score =  232 bits (117), Expect = 5e-60
 Identities = 142/149 (95%), Gaps = 1/149 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1224 ggaaatcgggagggagaagacaactattgctgacctggcgaaccgattttcagaatcaat 1283
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 445  ggaaatcgggagggagaagaccactattgctgacctggcgaaccgattttcagaatccat 386

                                                                        
Query: 1284 tggtttacagagacctcctgctctcttccgaaaaactgcacttaaaatgggtttgaagga 1343
            |||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 385  tggtttaccgagacctcctgctctctttcgtaaaactgcacttaaaatgggtttgaagga 326

                                         
Query: 1344 cattcctggcattag-aattcgtagatag 1371
            |||||||||| |||| |||||||||||||
Sbjct: 325  cattcctggccttagaaattcgtagatag 297


>gnl|LJGI|AV767433 homologue to UniRef100_A7PZU7 Cluster: Chromosome chr15
           scaffold_40, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr15 scaffold_40, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (17%)
          Length = 383

 Score = 56.0 bits (28), Expect = 6e-07
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                               
Query: 346 tgccagattcttgttgctacacctggaaggttgctggaccatgttgagaata 397
           |||||||| ||||||||||||||||||||| |   ||| |||||||||||||
Sbjct: 33  tgccagatccttgttgctacacctggaaggcttagggatcatgttgagaata 84