Miyakogusa Predicted Gene

Lj0g3v0125939.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0125939.1 Non Chatacterized Hit- tr|B9R7N6|B9R7N6_RICCO
Multidrug resistance pump, putative OS=Ricinus
communi,76.71,0,seg,NULL; MatE,Multi antimicrobial extrusion protein;
MATE EFFLUX FAMILY PROTEIN,NULL; MULTIDRUG RES,CUFF.7557.1
         (750 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV776569 similar to UniRef100_A7NTK1 Cluster: Chromosom...  1201   0.0  
gnl|LJGI|TC72883 similar to UniRef100_A7PXG2 Cluster: Chromosome...    62   5e-09
gnl|LJGI|TC64715 similar to UniRef100_A7PXG2 Cluster: Chromosome...    62   5e-09

>gnl|LJGI|AV776569 similar to UniRef100_A7NTK1 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (42%)
          Length = 606

 Score = 1201 bits (606), Expect = 0.0
 Identities = 606/606 (100%)
 Strand = Plus / Plus

                                                                       
Query: 57  gaagccactgagcttggttcggagattcgggatcgagtccaagaagttgtggaagatagc 116
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gaagccactgagcttggttcggagattcgggatcgagtccaagaagttgtggaagatagc 60

                                                                       
Query: 117 aggtcctgcaattttaacaatgttgtgtcagtactcgcttggtgcattcaccctcacatt 176
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aggtcctgcaattttaacaatgttgtgtcagtactcgcttggtgcattcaccctcacatt 120

                                                                       
Query: 177 tgtaggccatgtgggagagctcgatcttgcagcagtttctgttgaaaactcttgcattgc 236
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtaggccatgtgggagagctcgatcttgcagcagtttctgttgaaaactcttgcattgc 180

                                                                       
Query: 237 tggcttctcctttggagtcatgttgggtatggggagtgccttggagactctctgtggaca 296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggcttctcctttggagtcatgttgggtatggggagtgccttggagactctctgtggaca 240

                                                                       
Query: 297 agcattcggtgcgggtcagagcaggatgttgggggtgtacatgcaaagatcatgggtcat 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agcattcggtgcgggtcagagcaggatgttgggggtgtacatgcaaagatcatgggtcat 300

                                                                       
Query: 357 cttatttactactgccttgattttggtccctgcatatgtttggtcacctcccatcttgag 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttatttactactgccttgattttggtccctgcatatgtttggtcacctcccatcttgag 360

                                                                       
Query: 417 ggtcattggacaaactactgaaatctcagaagctgctggaaaatttgctttgtggatgtt 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggtcattggacaaactactgaaatctcagaagctgctggaaaatttgctttgtggatgtt 420

                                                                       
Query: 477 accacagttgtttgcatatgctttcaactttccaatgcagaagttcttacagtcacagag 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 accacagttgtttgcatatgctttcaactttccaatgcagaagttcttacagtcacagag 480

                                                                       
Query: 537 gaaagtccaagtgatgttatggatatcagcaactgtcctggtgctacatatatttttcag 596
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaaagtccaagtgatgttatggatatcagcaactgtcctggtgctacatatatttttcag 540

                                                                       
Query: 597 ttggctcctaatactgaaacttgggtggggcttaactggagcagcaattactcttaacgc 656
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttggctcctaatactgaaacttgggtggggcttaactggagcagcaattactcttaacgc 600

                 
Query: 657 atcatg 662
           ||||||
Sbjct: 601 atcatg 606


>gnl|LJGI|TC72883 similar to UniRef100_A7PXG2 Cluster: Chromosome chr12 scaffold_36,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_36, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (42%)
          Length = 763

 Score = 61.9 bits (31), Expect = 5e-09
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                  
Query: 254 tcatgttgggtatggggagtgccttggagactctctgtggacaagcattcggtgc 308
           |||||||||||||||| |||||  ||||||| || |||||||||||||| |||||
Sbjct: 358 tcatgttgggtatgggaagtgctgtggagacgctatgtggacaagcatttggtgc 412


>gnl|LJGI|TC64715 similar to UniRef100_A7PXG2 Cluster: Chromosome chr12 scaffold_36,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_36, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (45%)
          Length = 821

 Score = 61.9 bits (31), Expect = 5e-09
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                  
Query: 254 tcatgttgggtatggggagtgccttggagactctctgtggacaagcattcggtgc 308
           |||||||||||||||| |||||  ||||||| || |||||||||||||| |||||
Sbjct: 376 tcatgttgggtatgggaagtgctgtggagacgctatgtggacaagcatttggtgc 430