Miyakogusa Predicted Gene

Lj0g3v0125909.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0125909.1 CUFF.7554.1
         (1452 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP064875                                                     396   e-109
gnl|LJGI|BW628155                                                     107   2e-22

>gnl|LJGI|BP064875 
          Length = 463

 Score =  396 bits (200), Expect = e-109
 Identities = 206/208 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1244 cgactgattcctatgagatgaaggccacaagtttaaaaggtttgttggttccctgcatta 1303
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 463  cgactgattcctatgagatgaaggccaccagtttaaaaggtttgttggttccctgcatta 404

                                                                        
Query: 1304 agtttatgacgaacttatgtagtggcggtttacctctcgatctcacacatctggattacg 1363
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403  agtttatgacgaacttatgtagtggcggtttacctctcgatctcacacatctggattacg 344

                                                                        
Query: 1364 atggatacaaacttgatattgtggagaaggagagctttcttgatgaaatgaaacaatttt 1423
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 343  atggatacaaacttgatattgtggagaaggagagctttcttgatgaaatgaaacgatttt 284

                                        
Query: 1424 cttccgcgttgaatgtgagaaatgagac 1451
            ||||||||||||||||||||||||||||
Sbjct: 283  cttccgcgttgaatgtgagaaatgagac 256


>gnl|LJGI|BW628155 
          Length = 464

 Score =  107 bits (54), Expect = 2e-22
 Identities = 150/182 (82%)
 Strand = Plus / Plus

                                                                        
Query: 966  attttgtgatgttcttaagaaaggaacgggagacctgggtttagacgccattgctgaggc 1025
            |||||||||||||||||||||||||| |    ||||||||||  | | | ||||||||||
Sbjct: 118  attttgtgatgttcttaagaaaggaaggaatcacctgggtttgaaagtctttgctgaggc 177

                                                                        
Query: 1026 ctttaaagaggtgggcaatgacttggttattgtcaaggtagacaacagttcttcagaaat 1085
             ||||||| | | | ||||  |||||||||||||||| |||  || | |||||| |||||
Sbjct: 178  atttaaagtgatagacaatcccttggttattgtcaagttagggaataattcttctgaaat 237

                                                                        
Query: 1086 tgtttgtccagatgctgagtttgtagatttcaaggtctgccagcgaaaagagctcatatt 1145
            ||| ||||||||||||| |||||||||||| | ||| |||| || || |||||| |||||
Sbjct: 238  tgtgtgtccagatgctgtgtttgtagatttaatggtatgcccgcaaagagagcttatatt 297

              
Query: 1146 gc 1147
            ||
Sbjct: 298  gc 299