Miyakogusa Predicted Gene

Lj0g3v0125289.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0125289.2 tr|G7L0K5|G7L0K5_MEDTR Nuclear pore complex
protein Nup205 OS=Medicago truncatula GN=MTR_7g099880
PE,84.86,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
DUF3414,Protein of unknown function DUF34,CUFF.7507.2
         (4620 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS320487 similar to UniRef100_A7PF31 Cluster: Chromosom...   854   0.0  

>gnl|LJGI|FS320487 similar to UniRef100_A7PF31 Cluster: Chromosome chr11 scaffold_13,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_13, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (9%)
          Length = 533

 Score =  854 bits (431), Expect = 0.0
 Identities = 437/439 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtttctcccaagcacctcctctccaccctcgaatcggtgcttctcgcccctacgcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 95  atggtttctcccaagcacctcctctccaccctcgaatcggtgcttctcggccctacgcca 154

                                                                       
Query: 61  ccgacggcggcgcaacgagttgagctctttcacgccattcgctcttctctccactccttc 120
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 155 ccgacggcggcgcaacgagttgagctctttcacaccattcgctcttctctccactccttc 214

                                                                       
Query: 121 cagtcgcttctatcctacccgcctccgaagccctcagatcgaagtcaagtgcagtcaaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 cagtcgcttctatcctacccgcctccgaagccctcagatcgaagtcaagtgcagtcaaag 274

                                                                       
Query: 181 tcaattaggcttccggattctcctcctatctcgcttgatgaccaggatgtgcagattgca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tcaattaggcttccggattctcctcctatctcgcttgatgaccaggatgtgcagattgca 334

                                                                       
Query: 241 cttaaattgagtgatgatctccatctcaatgaagtagattgcgttcgcttgcttgtatcg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 cttaaattgagtgatgatctccatctcaatgaagtagattgcgttcgcttgcttgtatcg 394

                                                                       
Query: 301 gctaatcaagagtggggcttaatgggaagggaaccactagaaattctacggcttgcagca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gctaatcaagagtggggcttaatgggaagggaaccactagaaattctacggcttgcagca 454

                                                                       
Query: 361 ggactctggtatacggagagaagagatttgataacatccctccatttgctgttaagggct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ggactctggtatacggagagaagagatttgataacatccctccatttgctgttaagggct 514

                              
Query: 421 gtggtgcttgatcagggac 439
           |||||||||||||||||||
Sbjct: 515 gtggtgcttgatcagggac 533