Miyakogusa Predicted Gene

Lj0g3v0124769.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0124769.1 Non Chatacterized Hit- tr|K4B9W3|K4B9W3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,33.33,1e-18,seg,NULL; Stig1,Stigma-specific protein
Stig1,CUFF.7486.1
         (502 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80514 weakly similar to UniRef100_A9RS02 Cluster: Pre...   533   e-151

>gnl|LJGI|TC80514 weakly similar to UniRef100_A9RS02 Cluster: Predicted protein; n=2;
           Physcomitrella patens|Rep: Predicted protein -
           Physcomitrella patens subsp. patens, partial (15%)
          Length = 776

 Score =  533 bits (269), Expect = e-151
 Identities = 451/509 (88%), Gaps = 7/509 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggggttcctaaaagtgatattcatcatagcaacaacaatggctttgtccattgcagca 60
           ||||||||||| |||| ||||||| ||||| ||| ||| |||||||||||||||||||||
Sbjct: 75  atggggttccttaaagcgatattcgtcataacaataaccatggctttgtccattgcagca 134

                                                                       
Query: 61  cttgtcacaatgaaaagcatcaccactg---aaggggaa---gcaaaaccatttgttcca 114
           || ||||||||||||| |||||||||     ||| ||||   |||||||||||  | || 
Sbjct: 135 ctcgtcacaatgaaaaacatcaccacaaccaaagaggaatcagcaaaaccattcctacct 194

                                                                       
Query: 115 tcacaaaagcaagtaccatttgcccatgagaaaaatatactccttccttcaaagagggtg 174
           ||| |    |||  || | | || |||||||| || | |||||||||||||||| |||||
Sbjct: 195 tcagactcacaaccactaatggctcatgagaagaacacactccttccttcaaagggggtg 254

                                                                       
Query: 175 aatcggtttctcgctcaaaagccagcatatccttacccttatcctgatccttccaattat 234
           | |||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 255 agtcggttcctcgctcaaaagccagcctatccttacccttatcctgatgcttccaattat 314

                                                                       
Query: 235 ccggttgtccattgccagaaggacaacgagatttgtgcctcattgagcaacagctattac 294
           ||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 315 ccggtcgtccattgccagaaggacaacgagatttgcacctcattgagcaacagctattac 374

                                                                       
Query: 295 aactccactt-gctgcaacaacaagtgcatggacgtgagctatgacaagcataactgcgg 353
           |||||||||| |||||||||||||||||||||| |||||||||||||||||||| || ||
Sbjct: 375 aactccacttcgctgcaacaacaagtgcatggatgtgagctatgacaagcataattgtgg 434

                                                                       
Query: 354 cgcgtgcaagaaaaagtgcaagtacaccaccacatgttgtagaggccaatgtgttgatat 413
            ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 435 tgcgtgcaagaagaagtgcaagtacaccaccacatgttgtagaggccaatgtgttgacat 494

                                                                       
Query: 414 caactttgacaagaggcattgtggtgcctgtaacaaccgctgcgaaaccggtcagtactg 473
           |||||||||||||||||||||||| |  || ||||||||||||||||| |||||| ||||
Sbjct: 495 caactttgacaagaggcattgtggcggttgcaacaaccgctgcgaaactggtcagcactg 554

                                        
Query: 474 tacctatggaatgtgtggttacgcatgag 502
           ||||||||||||||| |||||||| ||||
Sbjct: 555 tacctatggaatgtgcggttacgcttgag 583