Miyakogusa Predicted Gene

Lj0g3v0124459.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0124459.1 Non Chatacterized Hit- tr|G7LGE4|G7LGE4_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,72.48,0,UNCHARACTERIZED,NULL; DUF547,Domain of unknown
function DUF547,gene.g9494.t1.1
         (780 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77896                                                      420   e-117
gnl|LJGI|TC69993 similar to UniRef100_A7NTQ7 Cluster: Chromosome...    58   9e-08

>gnl|LJGI|TC77896 
          Length = 546

 Score =  420 bits (212), Expect = e-117
 Identities = 235/243 (96%)
 Strand = Plus / Plus

                                                                       
Query: 235 ttcctacttgggaaacttgcctctttaaatttgaagggccttaatcatcaggaaaaactt 294
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2   ttcctacttgggaaacttgcctctttaaatttgaaggnccttaatcatcaggaaaaactt 61

                                                                       
Query: 295 gcattctggataaacacttataattcctgcatgctaaatgcatatctagaacaaggcata 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  gcattctggataaacacttataattcctgcatgctaaatgcatatctagaacaaggcata 121

                                                                       
Query: 355 cctgagagtcctgaaatggttgtagcactaatgcaaaaggcaatgatagtagtggggggc 414
           |||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||
Sbjct: 122 cctgagagtcctgaaatggttgtagcactaatgccaaaggccattatagtagtggggggc 181

                                                                       
Query: 415 cagttggtcaatgcaattacaatagagcattttatcttgagacttccttatcatctgaag 474
           | |||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ccgttgctcaatgccattaccatagagcattttatcttgagacttccttatcatctgaag 241

              
Query: 475 ttt 477
           |||
Sbjct: 242 ttt 244


>gnl|LJGI|TC69993 similar to UniRef100_A7NTQ7 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (50%)
          Length = 1098

 Score = 58.0 bits (29), Expect = 9e-08
 Identities = 101/125 (80%)
 Strand = Plus / Plus

                                                                       
Query: 245 ggaaacttgcctctttaaatttgaagggccttaatcatcaggaaaaacttgcattctgga 304
           ||||||| |||||| | || ||||||  ||| || |||||||| || ||||| |||||||
Sbjct: 337 ggaaactagcctctgtcaacttgaagaacctcaaccatcaggagaagcttgcgttctgga 396

                                                                       
Query: 305 taaacacttataattcctgcatgctaaatgcatatctagaacaaggcatacctgagagtc 364
           | ||||||||||| || || ||| | |||||||   ||||  | |||||||| |||||||
Sbjct: 397 tcaacacttataactcgtgtatgatgaatgcattcatagagaatggcataccagagagtc 456

                
Query: 365 ctgaa 369
           |||||
Sbjct: 457 ctgaa 461