Miyakogusa Predicted Gene

Lj0g3v0124329.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0124329.1 Non Chatacterized Hit- tr|K3ZMT6|K3ZMT6_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si027906,25.74,0.000000002,coiled-coil,NULL,gene.g9480.t1.1
         (859 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO039188                                                    1405   0.0  

>gnl|LJGI|GO039188 
          Length = 845

 Score = 1405 bits (709), Expect = 0.0
 Identities = 712/713 (99%)
 Strand = Plus / Minus

                                                                       
Query: 147 cttggattctctagtgaacatttcttgcatagatggtgctgatcgtggcggtgttgagaa 206
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 cttggattctctagtgaacatttcttgcatagatggtgctgatcgtggcggtgttgagaa 776

                                                                       
Query: 207 gtacctagaagacaacactgagcttcttgattcatgcaattactttctggaaaaaatgga 266
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 gtacctagaagacaacactgagcttcttgattcatgcaattactttctggaaaaaatgga 716

                                                                       
Query: 267 aggtatcaacaagtatgtggacacattgagagtggttgcacatttggttgatgattctaa 326
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 aggtatcaacaagtatgtggacacattgagagtggttgcacatttggttgatgattctaa 656

                                                                       
Query: 327 gcctaattcagtggcagcaaaacgtgcattggaacttttggagtcatgtgagaagagatg 386
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 gcctaattcagtggcagcaaaacgtgcattggaacttttggagtcatgtgagaagagatg 596

                                                                       
Query: 387 cagagtaatggggaggaagaagaagaacagtggttcttgtttgaagaaactgttgcggca 446
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 cagagtaatggggaggaagaagaagaacagtggttcttgtttgaagaaactgttgcggca 536

                                                                       
Query: 447 aaagtatgaaaaaacagatcttggtgagatcatgtgtggttctaaggccatggctttgat 506
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 aaagtatgaaaaaacagatcttggtgagatcatgtgtggttctaaggccatggctttgat 476

                                                                       
Query: 507 gtgttgcagctttcttgagactggtctgtcatttgaatcaaaaagtggactggtttcagt 566
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gtgttgcagccttcttgagactggtctgtcatttgaatcaaaaagtggactggtttcagt 416

                                                                       
Query: 567 gaagcagtctcagcctgtgagatcttcatggttgagattattggaggagatggcaaagca 626
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gaagcagtctcagcctgtgagatcttcatggttgagattattggaggagatggcaaagca 356

                                                                       
Query: 627 atcgtctttgttgacaattgatgagttgcagcagacagtgactgcagctagagaattgaa 686
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 atcgtctttgttgacaattgatgagttgcagcagacagtgactgcagctagagaattgaa 296

                                                                       
Query: 687 ggtgcacatgaagggtaaaagggaaaaggagatgaaatctgctgttgagagattgaagaa 746
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ggtgcacatgaagggtaaaagggaaaaggagatgaaatctgctgttgagagattgaagaa 236

                                                                       
Query: 747 aagatgcaggggattggaggatgggattgagattattgagggaagagtgaaggatttgta 806
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 aagatgcaggggattggaggatgggattgagattattgagggaagagtgaaggatttgta 176

                                                                
Query: 807 tagaagtttgattgatgttaggatggctcttttgggaattctttcccaagcct 859
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 tagaagtttgattgatgttaggatggctcttttgggaattctttcccaagcct 123