Miyakogusa Predicted Gene

Lj0g3v0124309.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0124309.2 Non Chatacterized Hit- tr|E1F519|E1F519_GIAIA
Dynein heavy chain, putative OS=Giardia intestinalis (,39.62,4.8,
,CUFF.7481.2
         (207 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|CB829453 similar to UniRef100_A4IHI3 Cluster: Proteasom...   230   3e-60

>gnl|LJGI|CB829453 similar to UniRef100_A4IHI3 Cluster: Proteasome subunit alpha type;
           n=1; Xenopus tropicalis|Rep: Proteasome subunit alpha
           type - Xenopus tropicalis (Western clawed frog)
           (Silurana tropicalis), partial (5%)
          Length = 548

 Score =  230 bits (116), Expect = 3e-60
 Identities = 116/116 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaccctcttctgttgttatgttttcagatttcaaaacatgttgcaggttgctctgtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atgaaccctcttctgttgttatgttttcagatttcaaaacatgttgcaggttgctctgtg 323

                                                                   
Query: 61  ctccttctgaagcagaattttcataccaaaccatgcttgccaagcttgtggaaggt 116
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctccttctgaagcagaattttcataccaaaccatgcttgccaagcttgtggaaggt 379