Miyakogusa Predicted Gene

Lj0g3v0123959.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0123959.1 tr|B6UF44|B6UF44_MAIZE DNA binding protein OS=Zea
mays PE=4 SV=1,56.52,2e-18,no description,Helix-loop-helix domain;
coiled-coil,NULL; seg,NULL; HLH,Helix-loop-helix domain;
HLH,CUFF.7444.1
         (279 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70099 similar to UniRef100_A7QI73 Cluster: Chromosome...   553   e-157
gnl|LJGI|TC76252 similar to UniRef100_A7QI73 Cluster: Chromosome...    50   7e-06

>gnl|LJGI|TC70099 similar to UniRef100_A7QI73 Cluster: Chromosome chr17 scaffold_101,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_101, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (84%)
          Length = 676

 Score =  553 bits (279), Expect = e-157
 Identities = 279/279 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtctagcaggagatcacgttcaaggcaaacaagtagctcaaggaatatcaccgatgat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 atgtctagcaggagatcacgttcaaggcaaacaagtagctcaaggaatatcaccgatgat 335

                                                                       
Query: 61  cagatccatgatcttgtctccaagttgcaacagcttcttccagagattcgtgagaggcgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 cagatccatgatcttgtctccaagttgcaacagcttcttccagagattcgtgagaggcgc 395

                                                                       
Query: 121 tctgacaaggtttcagcatcaaaggtcttgcaagagacatgcaactacattagaagctta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tctgacaaggtttcagcatcaaaggtcttgcaagagacatgcaactacattagaagctta 455

                                                                       
Query: 181 caccgggaagttgatgatctgagtgagcgtttgtcagagctcttggctacaacagacaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 caccgggaagttgatgatctgagtgagcgtttgtcagagctcttggctacaacagacaca 515

                                                  
Query: 241 gcacaggctgcaatcattagaaacttgcttatgcaatag 279
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gcacaggctgcaatcattagaaacttgcttatgcaatag 554


>gnl|LJGI|TC76252 similar to UniRef100_A7QI73 Cluster: Chromosome chr17 scaffold_101,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_101, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (98%)
          Length = 1018

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 127/161 (78%)
 Strand = Plus / Plus

                                                                       
Query: 77  tctccaagttgcaacagcttcttccagagattcgtgagaggcgctctgacaaggtttcag 136
           |||||||||| ||||| ||| | || ||| ||||||  || ||||| ||||||||||| |
Sbjct: 580 tctccaagttacaacaacttatccctgagcttcgtgcaagacgctccgacaaggtttcgg 639

                                                                       
Query: 137 catcaaaggtcttgcaagagacatgcaactacattagaagcttacaccgggaagttgatg 196
           |  | ||||| ||||| ||||| |||||||| || |  | ||| ||  |||| |||||||
Sbjct: 640 ctgcgaaggtattgcaggagacttgcaactatataaagaacttgcatagggaggttgatg 699

                                                    
Query: 197 atctgagtgagcgtttgtcagagctcttggctacaacagac 237
           || ||||||| || || || ||||| ||||| || ||||||
Sbjct: 700 atttgagtgaccggttatcggagcttttggcgaccacagac 740