Miyakogusa Predicted Gene
- Lj0g3v0123879.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0123879.2 Non Chatacterized Hit- tr|F6HG18|F6HG18_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,47.62,2e-16,seg,NULL; P-loop containing nucleoside triphosphate
hydrolases,NULL; AAA_12,NULL; TRNA-SPLICING ENDO,CUFF.7464.2
(498 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76384 weakly similar to UniRef100_A7QTT0 Cluster: Chr... 955 0.0
gnl|LJGI|TC75827 weakly similar to UniRef100_A7QTT1 Cluster: Chr... 577 e-164
gnl|LJGI|TC69623 weakly similar to UniRef100_Q9SHX6 Cluster: F1E... 226 1e-58
>gnl|LJGI|TC76384 weakly similar to UniRef100_A7QTT0 Cluster: Chromosome undetermined
scaffold_171, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_171, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(28%)
Length = 1457
Score = 955 bits (482), Expect = 0.0
Identities = 494/498 (99%)
Strand = Plus / Plus
Query: 1 atgaggactaggaagaaaattagcattggaattatatctccctataattctcaagtttat 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 740 atgaggactaggaagaaaattaacattggaattatatctccctataattctcaagtttat 799
Query: 61 gaaatccaacagaaaattaagcaccacatttcagtttctgatcctgacttctctgtcagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gaaatccaacagaaaattaagcaccacatttcagtttctgatcctgacttctctgtcagt 859
Query: 121 gttcgttcggttgatggatttcaaggaggggaacaggatgttataataatttctactgtg 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 860 gttcgttcggttgatggatttaaaggaggggaacaggatgttataataatttctactgtg 919
Query: 181 agatctaatcctagtggaaaagtggggtttctttccaatagacaaagagcaaatgttgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 agatctaatcctagtggaaaagtggggtttctttccaatagacaaagagcaaatgttgct 979
Query: 241 atgactagggctagatatagcctttggatattaggaaatgcggcaacactggttagcagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980 atgactagggctagatatagcctttggatattaggaaatgcggcaacactggttagcagt 1039
Query: 301 gacacagtgtggaagcaggtagttcttgatgctaagaaaagagattgtttccatacagct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1040 gacacagtgtggaagcaggtagttcttgatgctaagaaaagagattgtttccatacagcc 1099
Query: 361 gataaggacaataaactggctcgggttattgaggatgttgtttttgagcttgaactactt 420
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1100 gataaggacaataaactggctcgggttattgaggatgttgtttttgagcttcaactactt 1159
Query: 421 gaagaatctgagtcgatgtttaagaaactgaatctaggggagaggtcttccaggcctcgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1160 gaagaatctgagtcgatgtttaagaaactgaatctaggggagaggtcttccaggcctcgg 1219
Query: 481 aaagcaaggaggtgataa 498
||||||||||||||||||
Sbjct: 1220 aaagcaaggaggtgataa 1237
>gnl|LJGI|TC75827 weakly similar to UniRef100_A7QTT1 Cluster: Chromosome undetermined
scaffold_171, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_171,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (6%)
Length = 595
Score = 577 bits (291), Expect = e-164
Identities = 303/307 (98%)
Strand = Plus / Plus
Query: 192 tagtggaaaagtggggtttctttccaatagacaaagagcaaatgttgctatgactagggc 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagtggaaaagtggggtttctttccaatagacaaagagcaaatgttgctatgactagggc 60
Query: 252 tagatatagcctttggatattaggaaatgcggcaacactggttagcagtgacacagtgtg 311
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagatatggcctttggatattaggaaatgcggcaacactggttagcagtgacacagtgtg 120
Query: 312 gaagcaggtagttcttgatgctaagaaaagagattgtttccatacagctgataaggacaa 371
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 121 gaagcaggtagttcttgatgctaagaaaagagattgtttccatacagccgataaggacaa 180
Query: 372 taaactggctcgggttattgaggatgttgtttttgagcttgaactacttgaagaatctga 431
| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 181 tcaactggctcgggttattgaggatgttgtttttgagcttcaactacttgaagaatctga 240
Query: 432 gtcgatgtttaagaaactgaatctaggggagaggtcttccaggcctcggaaagcaaggag 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtcgatgtttaagaaactgaatctaggggagaggtcttccaggcctcggaaagcaaggag 300
Query: 492 gtgataa 498
|||||||
Sbjct: 301 gtgataa 307
>gnl|LJGI|TC69623 weakly similar to UniRef100_Q9SHX6 Cluster: F1E22.16; n=1;
Arabidopsis thaliana|Rep: F1E22.16 - Arabidopsis
thaliana (Mouse-ear cress), partial (4%)
Length = 905
Score = 226 bits (114), Expect = 1e-58
Identities = 162/178 (91%)
Strand = Plus / Minus
Query: 253 agatatagcctttggatattaggaaatgcggcaacactggttagcagtgacacagtgtgg 312
|||||| |||||||||||||||||||||| |||||| || | ||||||||| ||||||||
Sbjct: 324 agatattgcctttggatattaggaaatgcagcaacattgatcagcagtgactcagtgtgg 265
Query: 313 aagcaggtagttcttgatgctaagaaaagagattgtttccatacagctgataaggacaat 372
| | ||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 264 agacgggttgttcttgatgctaagaaaagagattgtttccatacagctgatgaggacaag 205
Query: 373 aaactggctcgggttattgaggatgttgtttttgagcttgaactacttgaagaatctg 430
||||| ||||| ||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 204 aaactagctcgtgttattgaggatgttgtgtttgagcttgaacttcttgaagaatctg 147