Miyakogusa Predicted Gene
- Lj0g3v0123729.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0123729.1 Non Chatacterized Hit- tr|C0P5F8|C0P5F8_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,46.02,5e-19,Translational machinery components,NULL; STRUCTURAL
CONSTITUENT OF RIBOSOME,NULL; 39S RIBOSOMAL PROT,CUFF.7429.1
(564 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81495 homologue to UniRef100_A7QX13 Cluster: Chromoso... 850 0.0
gnl|LJGI|TC60738 homologue to UniRef100_A7QX13 Cluster: Chromoso... 841 0.0
>gnl|LJGI|TC81495 homologue to UniRef100_A7QX13 Cluster: Chromosome chr14
scaffold_211, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_211, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (68%)
Length = 643
Score = 850 bits (429), Expect = 0.0
Identities = 432/433 (99%)
Strand = Plus / Plus
Query: 112 gcgcatatggcaccaagaagctttttcggggtagaggatttccttgatgatgacaatagc 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gcgcatatggcaccaagaagctttttcggggtagaggatttccttgatgatgacaatagc 270
Query: 172 cgaccttacacataccaaaaagggaagaaatcaaagaatccaaataagcatgtatcattc 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 cgaccttacacataccaaaaagggaagaaatcaaagaatccaaataagcatgtatcattc 330
Query: 232 aaacaaagaacagttgcctacatggagcctttcacacttgatgtgtttatctcaaaacgc 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 aaacaaagaacagttgcctacatggagcctttcacacttgatgtgtttatctcaaaacgc 390
Query: 292 tttgtatcagcttcagtgacccacagggtgacaagcaaacaggttgcagttgctggcacc 351
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 391 tttgtatcagcttcagtgacccaccgggtgacaagcaaacaggttgcagttgctggcacc 450
Query: 352 aactccaaggacatcaaagccgttcttagatctcgttcagatataccagcgtgcatagcc 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aactccaaggacatcaaagccgttcttagatctcgttcagatataccagcgtgcatagcc 510
Query: 412 attggtcggattttgtctgaaagagcaagagaggctgatgtttatactgcttcttatact 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 attggtcggattttgtctgaaagagcaagagaggctgatgtttatactgcttcttatact 570
Query: 472 ccaagagatagggacaagttcgaagggaaaatcagagctgtagttcaatcacttattgat 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ccaagagatagggacaagttcgaagggaaaatcagagctgtagttcaatcacttattgat 630
Query: 532 aatggtattgata 544
|||||||||||||
Sbjct: 631 aatggtattgata 643
>gnl|LJGI|TC60738 homologue to UniRef100_A7QX13 Cluster: Chromosome chr14
scaffold_211, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_211, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (76%)
Length = 898
Score = 841 bits (424), Expect = 0.0
Identities = 529/564 (93%)
Strand = Plus / Plus
Query: 1 atgttgaagcaagcaattggcagaatttgcagaaccagtgtttatacttgcgaagtaaat 60
||||||||||||||| |||| ||||| ||||||||||||| ||| ||||| |||| ||||
Sbjct: 211 atgttgaagcaagcatttggtagaatatgcagaaccagtgcttacacttgtgaaggaaat 270
Query: 61 ggagttttgccttggaattatgtgccctcatgctgtttccacagtggacaagcgcatatg 120
|||| ||||| |||| |||||||||||| |||| |||||||| |||||||| ||||||
Sbjct: 271 agagtcttgccatggatttatgtgccctcgtgctttttccacaatggacaagttcatatg 330
Query: 121 gcaccaagaagctttttcggggtagaggatttccttgatgatgacaatagccgaccttac 180
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 331 gcaccaagaagcttttttggggtagaggatttccttgatgatgacaacagccgaccttac 390
Query: 181 acataccaaaaagggaagaaatcaaagaatccaaataagcatgtatcattcaaacaaaga 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 391 acataccaaaaagggaagaagtcaaagaatccaaataagcatgtatcattcaaacaaaga 450
Query: 241 acagttgcctacatggagcctttcacacttgatgtgtttatctcaaaacgctttgtatca 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 acagttgccttcatggagcctttcacacttgatgtgtttatctcaaaacgctttgtatca 510
Query: 301 gcttcagtgacccacagggtgacaagcaaacaggttgcagttgctggcaccaactccaag 360
|||||||| || || |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 511 gcttcagtcactcatagggtgacaagcaaacaggttgcagttgctggtaccaactccaag 570
Query: 361 gacatcaaagccgttcttagatctcgttcagatataccagcgtgcatagccattggtcgg 420
||||| ||||| |||||| |||||||||| || ||||| |||||||||||||||||||||
Sbjct: 571 gacattaaagctgttcttcgatctcgttctgacataccggcgtgcatagccattggtcgg 630
Query: 421 attttgtctgaaagagcaagagaggctgatgtttatactgcttcttatactccaagagat 480
||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 631 attttagctgaaagagcaagagaggctgatgtttacactgcttcttatactccaagggat 690
Query: 481 agggacaagttcgaagggaaaatcagagctgtagttcaatcacttattgataatggtatt 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 691 agggacaagttcgaagggaaaatcagagctgtagttcaatcacttattgataatgggatt 750
Query: 541 gatatcaaggtttatcttgattga 564
||||||||||||||||||||||||
Sbjct: 751 gatatcaaggtttatcttgattga 774