Miyakogusa Predicted Gene

Lj0g3v0123219.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0123219.1 Non Chatacterized Hit- tr|A5BE80|A5BE80_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,54.17,3e-18,seg,NULL; LEA_6,Late embryogenesis abundant protein,
LEA-18,CUFF.7382.1
         (282 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71602 similar to UniRef100_Q9LL46 Cluster: LEA-18; n=...   345   9e-95

>gnl|LJGI|TC71602 similar to UniRef100_Q9LL46 Cluster: LEA-18; n=1; Phaseolus
           vulgaris|Rep: LEA-18 - Phaseolus vulgaris (Kidney bean)
           (French bean), partial (91%)
          Length = 512

 Score =  345 bits (174), Expect = 9e-95
 Identities = 259/288 (89%), Gaps = 12/288 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagaaggaaacaaaggcacagagtgaatcaggtaaaggtggtgcaagcattgaaggg 60
           |||||||||||||||||||| ||||||||||||| ||||||      |||||||||||||
Sbjct: 1   atggagaaggaaacaaaggcgcagagtgaatcagctaaagg------aagcattgaaggg 54

                                                                       
Query: 61  cttccatttgaggacagtccctacgtgcaatacaaggatttggaggattacaagcgtcag 120
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 55  cttccatttgaggacagtccctacgtgcaatacaaggatttggaggattataagcgtcag 114

                                                                       
Query: 121 ggttatggcactgaaggtcatcaggaaccaaagcccggtcgtggcgccggcgcgacggag 180
           ||||||||||||||||||||||||||||| ||| ||||||| ||||||||||| ||||||
Sbjct: 115 ggttatggcactgaaggtcatcaggaaccgaaggccggtcgcggcgccggcgccacggag 174

                                                                       
Query: 181 gcacccacgctctccggtgcggcggtttcctctcaggcccaggctcagg------ataaa 234
           ||||| |||||||||||||||||||||||||||||||||||||||||||      |||| 
Sbjct: 175 gcacctacgctctccggtgcggcggtttcctctcaggcccaggctcaggctaaggataag 234

                                                           
Query: 235 gcccaacccactggaactggcgccactaatcgccaaggagttccttaa 282
           ||||| || ||||||||||  | || | ||||||||||||| ||||||
Sbjct: 235 gcccagccaactggaactgatgtcattgatcgccaaggagtcccttaa 282