Miyakogusa Predicted Gene
- Lj0g3v0122909.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0122909.1 CUFF.7353.1
(1149 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV777431 712 0.0
gnl|LJGI|TC76376 similar to UniRef100_Q1JX87 Cluster: Cytochrome... 133 3e-30
gnl|LJGI|TC80541 92 9e-18
gnl|LJGI|AV776597 similar to UniRef100_O21477 Cluster: Cytochrom... 86 6e-16
gnl|LJGI|TC63699 76 5e-13
gnl|LJGI|BP057320 64 2e-09
gnl|LJGI|TC81515 52 8e-06
>gnl|LJGI|AV777431
Length = 564
Score = 712 bits (359), Expect = 0.0
Identities = 375/383 (97%)
Strand = Plus / Minus
Query: 767 tagtttggcttccttgtggctttaaaggtattggatattatttatttgggccacaccatg 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tagtttggcttccttgtggctttaaaggtattggatattatttatttgggccacaccatg 505
Query: 827 ttgaatccatttcatggctactcaccatgtataccactggatattcacgtggacattgga 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttgaatccatttcatggctactcaccatgtataccactggatattcacgtggacattgga 445
Query: 887 tttggaagatgctggaccaccattttcttgtttctttaagccgtagctattttacaaaca 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tttggaagatgctggaccaccattttcttgtttctttaagccgtagctattttacaaaca 385
Query: 947 gtggtgatcctatattgggctccagccaagttcacagctctttactctcttggatccttc 1006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtggtgatcctatattgggctccagccaagttcacagctctttactctcttggatccttc 325
Query: 1007 tcattgcttggatagctcaattggtttgttttctcttgggtcagcccatttggaccatcc 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tcattgcttggatagctcaattggtttgttttctcttgggtcagcccatttggaccatcc 265
Query: 1067 nnnnnnnncaacccatccttgaggacaaggatgctcttccagcggatggtaatggtagaa 1126
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttttttttcaacccatccttgaggacaaggatgctcttccagcggatggtaatggtagaa 205
Query: 1127 ggttcattctaatggacttatag 1149
|||||||||||||||||||||||
Sbjct: 204 ggttcattctaatggacttatag 182
>gnl|LJGI|TC76376 similar to UniRef100_Q1JX87 Cluster: Cytochrome c assembly protein;
n=1; Desulfuromonas acetoxidans DSM 684|Rep: Cytochrome
c assembly protein - Desulfuromonas acetoxidans DSM 684,
partial (6%)
Length = 1236
Score = 133 bits (67), Expect = 3e-30
Identities = 133/155 (85%)
Strand = Plus / Plus
Query: 350 tggaaagacaagccttgcataacactatgtccacatggcgtccaaagaaacttgctcccc 409
|||| ||||||||||||||||||||| ||| |||| || ||| || ||| ||||||| ||
Sbjct: 524 tggacagacaagccttgcataacactgtgttcacaaggggtcaaacgaagcttgctcacc 583
Query: 410 atgtccaacattctgtcaatttggtcttgcttatattgggctggtcttatgagactcccc 469
| |||||| || |||||| ||| |||||||||||||||||| |||||||||||||||
Sbjct: 584 acactcaacatcctttcaattgggttttgcttatattgggctggacttatgagactcccc 643
Query: 470 taaggccaccacttgaattgtctctcccacaaggc 504
| |||||||||||||||||||| ||| |||||||
Sbjct: 644 aatggccaccacttgaattgtctttccaacaaggc 678
Score = 93.7 bits (47), Expect = 2e-18
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 90 caccaattccaaagaagtgtctcttgcagctgtcgtagccaaggtcccatccaaagctac 149
|||||| ||||||||||| |||||||||||| || ||| ||||||||||||||||||| |
Sbjct: 351 caccaaatccaaagaagtctctcttgcagctatcatagacaaggtcccatccaaagctgc 410
Query: 150 attggaactcatattcgggctct 172
|||||||| ||| || |||||||
Sbjct: 411 attggaacacattttggggctct 433
Score = 67.9 bits (34), Expect = 1e-10
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 196 ttggggaattcaaaatttgcactattaattgttacttttgtgcttcttcaaggacctaaa 255
||||||||| ||| | | |||| |||||||||||||| |||||||||||| |||| | |
Sbjct: 433 ttggggaatgcaacagtagcacaattaattgttacttctgtgcttcttcagggacatcca 492
Query: 256 aatctacaaggtgtgtcattttccccacca 285
||| |||| |||| |||||||||||||||
Sbjct: 493 catccacaatgtgtatcattttccccacca 522
Score = 56.0 bits (28), Expect = 5e-07
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 1079 ccatccttgaggacaaggatgctcttccagcggatggtaatggtagaaggtt 1130
||||||||||||||||||||| | ||| || |||||||||||||||| ||||
Sbjct: 939 ccatccttgaggacaaggatg-ttttcaaggggatggtaatggtagagggtt 989
>gnl|LJGI|TC80541
Length = 783
Score = 91.7 bits (46), Expect = 9e-18
Identities = 88/102 (86%)
Strand = Plus / Plus
Query: 400 cttgctccccatgtccaacattctgtcaatttggtcttgcttatattgggctggtcttat 459
||||||| ||||| ||||| ||| |||||| |||||| ||||||||||||||||||||
Sbjct: 88 cttgctcaccatgctcaacactctttcaattgggtctttcttatattgggctggtcttac 147
Query: 460 gagactcccctaaggccaccacttgaattgtctctcccacaa 501
||||| ||||| | |||||||||||||||||| ||| ||||
Sbjct: 148 aagacttccctatgtccaccacttgaattgtctttccaacaa 189
Score = 56.0 bits (28), Expect = 5e-07
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 1079 ccatccttgaggacaaggatgctcttccagcggatggtaatggtagaaggtt 1130
||||||||||||||||||||| | ||| || |||||||||||||||| ||||
Sbjct: 435 ccatccttgaggacaaggatg-ttttcaaggggatggtaatggtagagggtt 485
>gnl|LJGI|AV776597 similar to UniRef100_O21477 Cluster: Cytochrome b; n=2; Oceanodroma
leucorhoa|Rep: Cytochrome b - Oceanodroma leucorhoa,
partial (6%)
Length = 569
Score = 85.7 bits (43), Expect = 6e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 1075 caacccatccttgaggacaaggatgctcttccagcggatggtaatggtagaaggttcat 1133
|||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||
Sbjct: 246 caacccatccttgaggacaaggatgctctttaaggggatggtaatggtagaaggctcat 188
>gnl|LJGI|TC63699
Length = 738
Score = 75.8 bits (38), Expect = 5e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 432 ggtcttgcttatattgggctggtcttatgagactcccctaaggccaccacttgaattgtc 491
||||||||||||||||| ||||||||| ||||| ||||| | |||||||||||||||||
Sbjct: 140 ggtcttgcttatattggactggtcttacaagacttccctatgtccaccacttgaattgtc 199
Query: 492 tctcccacaa 501
| ||| ||||
Sbjct: 200 tttccaacaa 209
Score = 56.0 bits (28), Expect = 5e-07
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 1079 ccatccttgaggacaaggatgctcttccagcggatggtaatggtagaaggtt 1130
||||||||||||||||||||| | ||| || |||||||||||||||| ||||
Sbjct: 454 ccatccttgaggacaaggatg-ttttcaaggggatggtaatggtagagggtt 504
>gnl|LJGI|BP057320
Length = 420
Score = 63.9 bits (32), Expect = 2e-09
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 1075 caacccatccttgaggacaaggatgctcttccagcggatggtaatggtagaaggtt 1130
|||| |||||||||||||||||||| | ||| || |||||||||||||||||||||
Sbjct: 260 caactcatccttgaggacaaggatgtt-ttcaaggggatggtaatggtagaaggtt 206
>gnl|LJGI|TC81515
Length = 474
Score = 52.0 bits (26), Expect = 8e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 1080 catccttgaggacaaggatgctcttccagcggatggtaatggtaga 1125
|||||||||||||||||||| | ||| || ||||||||||||||||
Sbjct: 184 catccttgaggacaaggatg-ttttcaaggggatggtaatggtaga 228