Miyakogusa Predicted Gene
- Lj0g3v0122869.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0122869.1 Non Chatacterized Hit- tr|G3AFJ7|G3AFJ7_SPAPN
Putative uncharacterized protein OS=Spathaspora
passal,30.25,0.0000004,coiled-coil,NULL; Elongin_A,RNA polymerase II
transcription factor SIII, subunit A;
ELONGIN-A-RELATE,NODE_7552_length_995_cov_78.212059.path1.1
(672 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63765 weakly similar to UniRef100_A7PJP3 Cluster: Chr... 1291 0.0
gnl|LJGI|BW594818 weakly similar to UniRef100_A7PJP3 Cluster: Ch... 755 0.0
>gnl|LJGI|TC63765 weakly similar to UniRef100_A7PJP3 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (90%)
Length = 1073
Score = 1291 bits (651), Expect = 0.0
Identities = 665/672 (98%)
Strand = Plus / Plus
Query: 1 atgatgagaagagatcaagtgcctgtgcgtaagctgccaagcctggttgatctttgtgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 atgatgagaagagatcaagtgcctgtgcgtaagctgccaagcctggttgatctttgtgtt 226
Query: 61 gagaaagtgatagacaatttaaggtaccttggaaatgttggctctgttgatcaccatctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 gagaaagtgatagacaatttaaggtaccttggaaatgttggctctgttgatcaccatctg 286
Query: 121 cttgagcgaatcttgccgcactgcacactcgaacagttgatgcatgtggagaaggctagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 cttgagcgaatcttgccgcactgcacactcgaacagttgatgcatgtggagaaggctagc 346
Query: 181 gtgggatgtgatctgagccctgtaactgataaattgtggaaaaagttctttgagaagcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gtgggatgtgatctgagccctgtaactgataaattgtggaaaaagttctttgagaagcag 406
Query: 241 tttggcacacatagcactaatgaagtaattaagaggatgagagagaaaaaagtgtcattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 tttggcacacatagcactaatgaagtaattaagaggatgagagagaaaaaagtgtcattt 466
Query: 301 aaatggatgcagctgtatgaggcaaaagtgaaggaaatagctgaggctgagaatgaagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 aaatggatgcagctgtatgaggcaaaagtgaaggaaatagctgaggctgagaatgaagca 526
Query: 361 gttgctcgaatcaagcaacgataccagaaagaagatgcaagaaagcaaagtaggcaagta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 gttgctcgaatcaagcaacgataccagaaagaagatgcaagaaagcaaagtaggcaagta 586
Query: 421 cagctatgcactaaaactccaccttcgagtnnnnnnngattttggggagataatggatac 480
|||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 587 cagctatgcactaaaactccaccttcgagtaaaaaaagattttggggagataatggatac 646
Query: 481 aatgtatcaaatctgaagagcaacataatgaagaagtcaaggatagaacttctaaagagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 aatgtatcaaatctgaagagcaacataatgaagaagtcaaggatagaacttctaaagagt 706
Query: 541 catgaggtgaaaaatcttgcagcaatgaagaacaagtccatccagagaaataacagtcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 catgaggtgaaaaatcttgcagcaatgaagaacaagtccatccagagaaataacagtcca 766
Query: 601 tcaagcttcatgaagtctggaaatggttcaagttcaaaagatcccagatctgcaaaaaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 tcaagcttcatgaagtctggaaatggttcaagttcaaaagatcccagatctgcaaaaaga 826
Query: 661 atatcttaggga 672
||||||||||||
Sbjct: 827 atatcttaggga 838
>gnl|LJGI|BW594818 weakly similar to UniRef100_A7PJP3 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (56%)
Length = 488
Score = 755 bits (381), Expect = 0.0
Identities = 395/402 (98%)
Strand = Plus / Plus
Query: 138 gcactgcacactcgaacagttgatgcatgtggagaaggctagcgtgggatgtgatctgag 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gcactgcacactcgaacagttgatgcatgtggagaaggctagcgtgggatgtgatctgag 63
Query: 198 ccctgtaactgataaattgtggaaaaagttctttgagaagcagtttggcacacatagcac 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 ccctgtaactgataaattgtggaaaaagttctttgagaagcagtttggcacacatagcac 123
Query: 258 taatgaagtaattaagaggatgagagagaaaaaagtgtcatttaaatggatgcagctgta 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 taatgaagtaattaagaggatgagagagaaaaaagtgtcatttaaatggatgcagctgta 183
Query: 318 tgaggcaaaagtgaaggaaatagctgaggctgagaatgaagcagttgctcgaatcaagca 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tgaggcaaaagtgaaggaaatagctgaggctgagaatgaagcagttgctcgaatcaagca 243
Query: 378 acgataccagaaagaagatgcaagaaagcaaagtaggcaagtacagctatgcactaaaac 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 acgataccagaaagaagatgcaagaaagcaaagtaggcaagtacagctatgcactaaaac 303
Query: 438 tccaccttcgagtnnnnnnngattttggggagataatggatacaatgtatcaaatctgaa 497
||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tccaccttcgagtaaaaaaagattttggggagataatggatacaatgtatcaaatctgaa 363
Query: 498 gagcaacataatgaagaagtcaaggatagaacttctaaagag 539
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gagcaacataatgaagaagtcaaggatagaacttctaaagag 405
Score = 168 bits (85), Expect = 3e-41
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 561 agcaatgaagaacaagtccatccagagaaataacagtccatcaagcttcatgaagtctgg 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 agcaatgaagaacaagtccatccagagaaataacagtccatcaagcttcatgaagtctgg 463
Query: 621 aaatggttcaagttcaaaagatccc 645
|||||||||||||||||||||||||
Sbjct: 464 aaatggttcaagttcaaaagatccc 488