Miyakogusa Predicted Gene
- Lj0g3v0122739.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0122739.1 Non Chatacterized Hit- tr|I3SBU3|I3SBU3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,38.17,1e-18,FBOX,F-box domain, cyclin-like; A Receptor for
Ubiquitination Targets,F-box domain, cyclin-like; dom,CUFF.7341.1
(1197 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77884 547 e-155
gnl|LJGI|TC76992 similar to UniRef100_A0KCX4 Cluster: Binding-pr... 462 e-129
gnl|LJGI|DC594943 similar to UniRef100_A7QK60 Cluster: Chromosom... 182 3e-45
>gnl|LJGI|TC77884
Length = 548
Score = 547 bits (276), Expect = e-155
Identities = 352/367 (95%), Gaps = 9/367 (2%)
Strand = Plus / Plus
Query: 839 gctgggttggtgtaatggaagtgctcccttattgtcccaagcttcaaactcttgacattg 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctgggttggtgtaatggaagtgctcccttattgtcccaagcttcaaactcttgacattg 60
Query: 899 aaaagcttgtgtactggcataattaccaagagaaatgggcacatacaaaagaacttgttc 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaagcttgtgtactggcataattaccaagagaaatgggcacatacaaaagaacttgttc 120
Query: 959 cagaatgtgtttcattaca-tcttacaacatgctcta-ttggaaactatcaaatta-aag 1015
||||||||||||||||||| ||||||| ||||||| |||||||||||||||||| |||
Sbjct: 121 cagaatgtgtttcattacactcttacacactgctctacttggaaactatcaaattacaag 180
Query: 1016 gcatgtatgatgattttgattttacagcttatatcctac--aaaatgcaagggt-ttta- 1071
||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||
Sbjct: 181 gcatgtatgatgattttgattttacagcttatatcctaccacaactgcaagggtctttag 240
Query: 1072 caagtgctgacccttcacatta-accgtcactcggatgaatctgagaaggaccgattttt 1130
|| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 241 catgtgctgacccttcacattacaccgtcactcggatgaatctgagaaggaccgattttt 300
Query: 1131 caaacgtttatccaggtgttcgaggatctctccagcatgtaa-aattgaatgcatattcg 1189
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 301 caaacgtttatccaggtgttcgaggatctctccagcatgtaacaattgaatgcatattcg 360
Query: 1190 ttcctta 1196
|||||||
Sbjct: 361 ttcctta 367
>gnl|LJGI|TC76992 similar to UniRef100_A0KCX4 Cluster: Binding-protein-dependent
transport systems inner membrane component; n=2;
Burkholderia cenocepacia|Rep: Binding-protein-dependent
transport systems inner membrane component -
Burkholderia cenocepacia (strain HI2424), partial (5%)
Length = 1195
Score = 462 bits (233), Expect = e-129
Identities = 399/455 (87%), Gaps = 22/455 (4%)
Strand = Plus / Plus
Query: 155 ccctccatttcgacgacaaagccgaagaagacgaagagacctacacccgcttccgccgct 214
|||||||||||||| |||||||||||||||| | ||||| ||||||||||||||| ||||
Sbjct: 4 ccctccatttcgac-acaaagccgaagaagatgtagagatctacacccgcttccgtcgct 62
Query: 215 tcgtcgacaatgttctcctctccccgcgtttccagcaccaccctatcgagacgctctcca 274
| || ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||
Sbjct: 63 ttgttgacaatgttctcctctccccgcgcttccaacaccacccaatcgagacgctctcca 122
Query: 275 tcgtgtctcactccgagctcagccgcaaccgttgccggttcaacacagacgagtggattg 334
||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||
Sbjct: 123 tcgtgtctcactccgagctcagcagccaccgttgtcggttcaacacagacgagtggattg 182
Query: 335 aagccgcgaaacggcgtagcgtcaagaatctccagctgtccacagtatgttctcaattat 394
|||| ||| | |||||||||| |||||||||||| ||| |||||| || |
Sbjct: 183 aagc----------cgtttcatcaagaatcttcagctgtccacaatatattctcacttgt 232
Query: 395 gcttgttgcccggtat--------tttcacttcctcccaaacccttgtggttctgaagct 446
|||||||||||||||| |||||| |||||||||||||||| ||||||||||||
Sbjct: 233 gcttgttgcccggtattttcacaatttcacctcctcccaaacccttggggttctgaagct 292
Query: 447 tactgggatagtcatggatcatggtgttggttctgttgatcttccctcactcagaaccct 506
||||||||||||||||||||||||| |||||||||| |||||||||||| | |||| |
Sbjct: 293 tactgggatagtcatggatcatggttttggttctgt---tcttccctcacttaaaaccgt 349
Query: 507 tcatttgaatcatgttttgtttgatcaaagggacgatgtgatgaaaattcttaatgggtg 566
|||||||||| | ||||||||||| ||||| |||||||||| ||||||||||||||||||
Sbjct: 350 tcatttgaataaggttttgtttgagcaaagtgacgatgtgaagaaaattcttaatgggtg 409
Query: 567 tcccattgttgaggatttgactgtattaactccca 601
|||||||||||||||||| | ||||||| ||||||
Sbjct: 410 tcccattgttgaggatttaattgtattagctccca 444
Score = 214 bits (108), Expect = 1e-54
Identities = 154/168 (91%), Gaps = 1/168 (0%)
Strand = Plus / Plus
Query: 736 atggagcgtaggtgccctgacgtatatatcgaatcctactacagagaaaagcccgtgttt 795
||||||||||||| ||||||| || ||| | |||||||||||||||| ||||| |||
Sbjct: 492 atggagcgtaggttccctgacaaatgcatcaactcctactacagagaaatgcccgc-ttt 550
Query: 796 cgaaacttaatcaaccttaagctatcctttgtttgcttccctggctgggttggtgtaatg 855
||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 551 cgaaatttaatcaaccttaagctaacctttgtttgcttccctggctgggttggtgtaatg 610
Query: 856 gaagtgctcccttattgtcccaagcttcaaactcttgacattgaaaag 903
|||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 611 gaagcgctcccttattgtcccaagcttcaaactcttgccattgaaaag 658
>gnl|LJGI|DC594943 similar to UniRef100_A7QK60 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 141
Score = 182 bits (92), Expect = 3e-45
Identities = 104/108 (96%)
Strand = Plus / Plus
Query: 1 atgaggaagaaaaatcagccgaagatagaagatctgctcagcgccttaccggacgaaatc 60
|||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 9 atgaggaagaaaaatccgcccaagatagaagatctgctcagcgccttaccggaccaaatc 68
Query: 61 ctccgctacatcctctcatttctgccaaccaaattcgcattcaccacc 108
|||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 69 ctccgctacatcctctcatttctgccaaccaaattcccattcaccacc 116