Miyakogusa Predicted Gene

Lj0g3v0122309.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0122309.1 Non Chatacterized Hit- tr|I3S423|I3S423_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.18,0,CYTOCHROME B5 DOMAIN-CONTAINING PROTEIN 2,NULL;
MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-,CUFF.7310.1
         (735 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66888 similar to UniRef100_A7PBX8 Cluster: Chromosome...  1441   0.0  

>gnl|LJGI|TC66888 similar to UniRef100_A7PBX8 Cluster: Chromosome chr2 scaffold_11,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_11, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (73%)
          Length = 849

 Score = 1441 bits (727), Expect = 0.0
 Identities = 733/735 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagtttgaaaacactagcaacctctcctctttcagtgatcacatttgtggtccttctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29  atgagtttgaaaacactagcaacctctcctctttcagtgatcacatttgtggtccttctt 88

                                                                       
Query: 61  ctcgctctctatctcagattttccatcaaattcgactccgcacaaccggcacagaggttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89  ctcgctctctatctcagattttccatcaaattcgactccgcacaaccggcacagaggttg 148

                                                                       
Query: 121 ttcaatgctgaagagcttgcattgttcaatggaactgatgaagggttgccaattcttcta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 ttcaatgctgaagagcttgcattgttcaatggaactgatgaagggttgccaattcttcta 208

                                                                       
Query: 181 ggaattcttggatctgtgtatgatgtaacaaagggaaaatctcattatggttcaggaggg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ggaattcttggatctgtgtatgatgtaacaaagggaaaatctcattatggttcaggaggg 268

                                                                       
Query: 241 ggctacaatcattttgctggaagggatgcttctcgcgcgtttgtgtcaggaaatttcaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ggctacaatcattttgctggaagggatgcttctcgcgcgtttgtgtcaggaaatttcaca 328

                                                                       
Query: 301 ggagatggtctcaccgactcattacgcggtctatctagcgctgaggtgaagagtgtcatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ggagatggtctcaccgactcattacgcggtctatctagcgctgaggtgaagagtgtcatt 388

                                                                       
Query: 361 gattggagggatttctattccagaacttataagtacgttggcaaactagttggtcgatac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gattggagggatttctattccagaacttataagtacgttggcaaactagttggtcgatac 448

                                                                       
Query: 421 tacgatagccagggaaatcctactaaatacttgaaaggggttgaagcaaaggccgccaga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tacgatagccagggaaatcctactaaatacttgaaaggggttgaagcaaaggccgccaga 508

                                                                       
Query: 481 ggtgcacagcttctagaaaagcagaagactgaagaggctaagcaacctgcatgcaattca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ggtgcacagcttctagaaaagcagaagactgaagaggctaagcaacctgcatgcaattca 568

                                                                       
Query: 541 agatggagtcaagatgaaggtggagaggtatggtgtgaagttggctaccctaggttggtt 600
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 agatggagtcaaggtgaaggtggagaggtatggtgtgaagttggctaccctaggttggtt 628

                                                                       
Query: 601 cagaggccacttgaaattgcgatgaccgggaagatgagcaggcgttgtgcttgctttgaa 660
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 629 cagaggccacttgaaattgcgatgaccgggaagatgagcaggcgttgtgcctgctttgaa 688

                                                                       
Query: 661 gagtctcagctgggccaaactggtttagaactatatgaagggtgtgattaccatgctaac 720
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gagtctcagctgggccaaactggtttagaactatatgaagggtgtgattaccatgctaac 748

                          
Query: 721 aggtgtaaagcctaa 735
           |||||||||||||||
Sbjct: 749 aggtgtaaagcctaa 763