Miyakogusa Predicted Gene

Lj0g3v0121919.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0121919.1 Non Chatacterized Hit- tr|C0HFZ2|C0HFZ2_MAIZE
Uncharacterized protein OS=Zea mays PE=4
SV=1,60.29,0.00000000000002,SUBFAMILY NOT NAMED,NULL; RNA
METHYLASE-RELATED,NULL,FS361265.path1.1
         (361 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS361265 similar to UniRef100_Q9LIN4 Cluster: Arabidops...   716   0.0  

>gnl|LJGI|FS361265 similar to UniRef100_Q9LIN4 Cluster: Arabidopsis thaliana genomic
           DNA, chromosome 3, BAC clone:F20C19; n=1; Arabidopsis
           thaliana|Rep: Arabidopsis thaliana genomic DNA,
           chromosome 3, BAC clone:F20C19 - Arabidopsis thaliana
           (Mouse-ear cress), partial (38%)
          Length = 709

 Score =  716 bits (361), Expect = 0.0
 Identities = 361/361 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgcttgttatggggggcaggcttgtgtttttctatcctgtattgcgagatgacgatttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgcttgttatggggggcaggcttgtgtttttctatcctgtattgcgagatgacgatttc 442

                                                                       
Query: 61  tcggaaatccatttcccagagcatccatgttttaaacttatttgttcttcggagcagatc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcggaaatccatttcccagagcatccatgttttaaacttatttgttcttcggagcagatc 382

                                                                       
Query: 121 cttagttcacgttatagcagagtgttactgacaatggtcaagataggtccttacacagag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttagttcacgttatagcagagtgttactgacaatggtcaagataggtccttacacagag 322

                                                                       
Query: 181 gaaatacaagaggaagctaggataaaacacattgaatttagggagaaccatgtgaagtgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaatacaagaggaagctaggataaaacacattgaatttagggagaaccatgtgaagtgg 262

                                                                       
Query: 241 ttagaagatggtaatcttcattctggagttttcagtccagctgatgatcagttatctgag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttagaagatggtaatcttcattctggagttttcagtccagctgatgatcagttatctgag 202

                                                                       
Query: 301 actggtgattttaagtcaattaaagatcaaaagcctaaatacagaggaaaatacgtttag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actggtgattttaagtcaattaaagatcaaaagcctaaatacagaggaaaatacgtttag 142

            
Query: 361 a 361
           |
Sbjct: 141 a 141