Miyakogusa Predicted Gene

Lj0g3v0121289.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0121289.1 Non Chatacterized Hit- tr|E0VG30|E0VG30_PEDHC
Putative uncharacterized protein OS=Pediculus humanus
,38.71,2e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; 5-METHYLCYTOSINE G/T
MISMATCH-SPECIFIC DNA GLYCOSYLASE,NULL; coi,CUFF.7232.1
         (2031 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58046 similar to UniRef100_A7R238 Cluster: Chromosome...   410   e-113

>gnl|LJGI|TC58046 similar to UniRef100_A7R238 Cluster: Chromosome undetermined
            scaffold_397, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_397, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (33%)
          Length = 1465

 Score =  410 bits (207), Expect = e-113
 Identities = 342/387 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1597 gataatacatgggtgcctccacgatctcatatacatctcattcaagaagatcatgccttt 1656
            ||||||||||||||||| || || |||||| ||||||| ||||| || ||||||      
Sbjct: 718  gataatacatgggtgccaccgcggtctcatttacatcttattcaggaggatcatattcgc 777

                                                                        
Query: 1657 gacccttggagagtattggcaatttgcatgctgctcaacctgactactggtcggcaggta 1716
            |||||||||||||| ||||  || |||||||| |||||| | ||||||||||| ||||||
Sbjct: 778  gacccttggagagtgttggtgatatgcatgctactcaacatcactactggtcgacaggta 837

                                                                        
Query: 1717 aaagaagttatatcaaactttttcaagttatgtcctgatgctgaaacctgcactcaagta 1776
            | || |||||||||| ||||||||| |||||| ||||||||  |||||||||||||||||
Sbjct: 838  agagcagttatatcagactttttcaggttatgccctgatgcacaaacctgcactcaagta 897

                                                                        
Query: 1777 tcagaagatgaaattttagaggtaatacggtcactaggcttacataaaagggctgctatg 1836
            ||| ||||||||||  | ||||||||||||  ||||||||||||||| ||||| ||||||
Sbjct: 898  tcaaaagatgaaatcgtggaggtaatacggaaactaggcttacataagagggcagctatg 957

                                                                        
Query: 1837 ctgcaacgcttttctcgtgaatatttggcggaaaattggactcatgtaactcagttacat 1896
            || |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 958  ctacaacgcttttctcgagaatatttggaggaaaattggactcatgtaactcagttacat 1017

                                                                        
Query: 1897 ggtgttggcaagtatggggctgatgcatatgccatattttgtacgggaaaatgggatcga 1956
            ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1018 ggtgttggcaagtatgctgctgatgcatatgccatattttgtacgggaaaatgggatcga 1077

                                       
Query: 1957 gtgacacccaatgatcataagctagtt 1983
            |||||||||   ||||| |||||||||
Sbjct: 1078 gtgacaccctcagatcacaagctagtt 1104