Miyakogusa Predicted Gene

Lj0g3v0121029.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0121029.1 CUFF.7207.1
         (526 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61291 similar to UniRef100_A7PV59 Cluster: Chromosome...   143   1e-33

>gnl|LJGI|TC61291 similar to UniRef100_A7PV59 Cluster: Chromosome chr4 scaffold_32,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_32, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (34%)
          Length = 972

 Score =  143 bits (72), Expect = 1e-33
 Identities = 200/235 (85%), Gaps = 7/235 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgactgctcaagttggtcagttgatgcctccgaggtcaactt-taactcctgaatctga 59
           ||||||||||||| ||||| |||| |||||||   |||||||| | |||  |||||||||
Sbjct: 552 atgactgctcaagctggtcggttgctgcctcctgtgtcaacttgtcact--tgaatctga 495

                                                                       
Query: 60  attaaaagaag-ggcaaactgcggcacaatcaataaccttacataataggaattttgacc 118
           ||| || |||| ||||||||||||||||||||  ||||||||| ||| ||||||||||||
Sbjct: 494 attcaa-gaagaggcaaactgcggcacaatcatcaaccttacagaatgggaattttgacc 436

                                                                       
Query: 119 tccatgccttaacaatagtttcaacccggatgagagcaacaatagaccgtgaagaaga-g 177
           ||||||||||| ||   ||||||||| ||| | ||||| || ||||||||| |||||| |
Sbjct: 435 tccatgccttagcagctgtttcaaccaggacgcgagcagcagtagaccgtggagaagatg 376

                                                                  
Query: 178 ccacaaagtccacaccttctacgtttgacaaaacatctcaaa-cccatctgttgc 231
           |||||| ||||||| ||||| |||| || |||||||| |||| ||||||||||||
Sbjct: 375 ccacaatgtccacaacttcttcgttggataaaacatcccaaatcccatctgttgc 321