Miyakogusa Predicted Gene

Lj0g3v0120789.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0120789.1 tr|G7JLX5|G7JLX5_MEDTR TIR-NBS-LRR RCT1-like
resistance protein OS=Medicago truncatula
GN=MTR_4g0150,42.48,0.000000000005,no description,NULL; DISEASE
RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE,NULL; LEUCINE-RICH
REP,gene.g9177.t1.1
         (699 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC598457 weakly similar to UniRef100_A7PQ89 Cluster: Ch...   295   2e-79
gnl|LJGI|AV406755 similar to UniRef100_A7Q7Z4 Cluster: Chromosom...    56   3e-07

>gnl|LJGI|DC598457 weakly similar to UniRef100_A7PQ89 Cluster: Chromosome chr18
           scaffold_24, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr18 scaffold_24, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (7%)
          Length = 570

 Score =  295 bits (149), Expect = 2e-79
 Identities = 188/201 (93%)
 Strand = Plus / Plus

                                                                       
Query: 335 gtattgaggtttatatggatgacaaacttaaaaggggagaaaatatctcatcctcattgt 394
           ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 370 gtattgaggtttacatggatgacaaactgaaaaggggagaaaatatctcatcctcattgt 429

                                                                       
Query: 395 tgcaagaaattgaagactctagggtttctataatcattttttcagaacactatgcaaatt 454
           | |||| |||||||| |||||| |||||||| ||||||||||||| | |||||||||| |
Sbjct: 430 tacaagcaattgaaggctctagagtttctatcatcattttttcagtaaactatgcaaact 489

                                                                       
Query: 455 caatatggtgcctacaagagctggagaaaatcatggagtgtcatagagctattggtcaag 514
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 490 caatatggtgcctacaagagctggagaaaatcatggaatgtcatagagctattggtcaag 549

                                
Query: 515 aagttctacctgtattctacg 535
           ||||| | |||||||||||||
Sbjct: 550 aagttgtccctgtattctacg 570


>gnl|LJGI|AV406755 similar to UniRef100_A7Q7Z4 Cluster: Chromosome chr18 scaffold_61,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_61, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (63%)
          Length = 412

 Score = 56.0 bits (28), Expect = 3e-07
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 475 ctggagaaaatcatggagtgtcatagagctattggtcaagaagt 518
           |||||||||||||| ||||| || ||| ||||||||||||||||
Sbjct: 293 ctggagaaaatcattgagtgccaaagaactattggtcaagaagt 336