Miyakogusa Predicted Gene
- Lj0g3v0120609.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0120609.1 Non Chatacterized Hit- tr|I1N258|I1N258_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,35.6,5e-19,F-box,F-box domain, cyclin-like; LRR_2,Leucine-rich
repeat 2; FBOX,F-box domain, cyclin-like;
FAMILY,NODE_65914_length_991_cov_10.083754.path2.1
(765 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63672 similar to UniRef100_A7QK60 Cluster: Chromosome... 349 2e-95
gnl|LJGI|FS341858 similar to UniRef100_A7QK60 Cluster: Chromosom... 84 1e-15
gnl|LJGI|TC62962 similar to UniRef100_A2Q1U7 Cluster: Cyclin-lik... 60 2e-08
gnl|LJGI|FS331731 similar to UniRef100_A7QK65 Cluster: Chromosom... 56 3e-07
gnl|LJGI|FS342663 similar to UniRef100_A7QK60 Cluster: Chromosom... 54 1e-06
gnl|LJGI|TC82434 similar to UniRef100_A7QK60 Cluster: Chromosome... 54 1e-06
>gnl|LJGI|TC63672 similar to UniRef100_A7QK60 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 848
Score = 349 bits (176), Expect = 2e-95
Identities = 233/252 (92%)
Strand = Plus / Plus
Query: 1 atggaaagcagggactgtaagcttctgcattcatctactatggacgacgataggatttgc 60
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 160 atggaaagcaggaaccgtaagcttctgcattcatctactatggacgacgataggattagc 219
Query: 61 agtttaccagaggaacttctctgccgcatactctcttttctcccaacaaagaacgccgtc 120
| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 attttaccggaggaacttctctgccgcatactctcttttctcccaacaaagaacgccgtc 279
Query: 121 gccaccagcgttctcgcgaagaagtggaaatcactgtggcgttcactccccactttggac 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 280 gccaccagcgttctcgcgaagaagtggaaatcactgtggcgttcactccccactctcgac 339
Query: 181 attgatgacgacaatataagcgaagacaaccatgctcgcttcgttgagtctttctctgca 240
|||||||| |||||||||| |||| | |||||||||||| |||||||| || ||||
Sbjct: 340 attgatgattgcaatataagcaaagaggagcatgctcgcttcattgagtctgtcaatgca 399
Query: 241 tatatcagctcc 252
| ||||||||||
Sbjct: 400 tttatcagctcc 411
Score = 280 bits (141), Expect = 1e-74
Identities = 208/229 (90%), Gaps = 1/229 (0%)
Strand = Plus / Plus
Query: 410 tacaaccaacaaaacacattatgtcgcctcttatattcactttcacaaatcttgtggttc 469
|||| |||||||||||||| ||||||||||| || |||||||||||||||||||||||||
Sbjct: 621 tacagccaacaaaacacat-atgtcgcctctcatcttcactttcacaaatcttgtggttc 679
Query: 470 tcaagctggaggcgataagattcaagcattttacctctgttgattttcccttccttaaaa 529
|||||||||||| | ||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 680 tcaagctggaggggttaagattcacttctttttcctctgttgattttcccttccttaaaa 739
Query: 530 ccctgcatctgcaagatttgctttttgacaatcgtcaatgtctcacaaaagtcctttctg 589
||||| ||||||||||||||||||| || |||| |||||||||| | |||||||||||||
Sbjct: 740 ccctgtatctgcaagatttgcttttcgaaaatcctcaatgtctcgccaaagtcctttctg 799
Query: 590 gatgcccagttcttgaggatttcaaagaagattgtatagttatggatgg 638
|||||||||||||||||||||||||||||| | ||||| |||| |||||
Sbjct: 800 gatgcccagttcttgaggatttcaaagaagttcgtatatttatcgatgg 848
>gnl|LJGI|FS341858 similar to UniRef100_A7QK60 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 700
Score = 83.8 bits (42), Expect = 1e-15
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 77 ttctctgccgcatactctcttttctcccaacaaagaacgccgtcgccaccagcgttctcg 136
||||||| ||||| ||||||||||||||||| ||| | || || || || ||| |||||
Sbjct: 122 ttctctgtcgcattctctcttttctcccaaccaagcaagctgttgcaacaagcattctct 181
Query: 137 cgaagaagtggaaatcactgtggcgttcactccccact 174
|||||||||||||| |||||||||||||| || |||||
Sbjct: 182 cgaagaagtggaaaccactgtggcgttcagtcaccact 219
Score = 56.0 bits (28), Expect = 3e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 504 ctctgttgattttcccttccttaaaaccctgcatct 539
|||||||||| ||||||||||||| |||||||||||
Sbjct: 534 ctctgttgatcttcccttccttaagaccctgcatct 569
>gnl|LJGI|TC62962 similar to UniRef100_A2Q1U7 Cluster: Cyclin-like F-box; FBD; n=1;
Medicago truncatula|Rep: Cyclin-like F-box; FBD -
Medicago truncatula (Barrel medic), partial (17%)
Length = 741
Score = 60.0 bits (30), Expect = 2e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 82 tgccgcatactctcttttctcccaacaaagaacgccgtcgccaccagcgttctc 135
|||||||||||||||||||||||||| || | ||||| || ||||||||||||
Sbjct: 189 tgccgcatactctcttttctcccaaccaaacaagccgttgcaaccagcgttctc 242
>gnl|LJGI|FS331731 similar to UniRef100_A7QK65 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 593
Score = 56.0 bits (28), Expect = 3e-07
Identities = 94/116 (81%)
Strand = Plus / Plus
Query: 79 ctctgccgcatactctcttttctcccaacaaagaacgccgtcgccaccagcgttctcgcg 138
||||||| |||||||||||||||||||| ||| | || || ||||| ||||||||| ||
Sbjct: 100 ctctgccatatactctcttttctcccaaccaagcaagctgttgccacaagcgttctctcg 159
Query: 139 aagaagtggaaatcactgtggcgttcactccccactttggacattgatgacgacaa 194
||| |||| | || ||||||||| |||||||| ||||| | |||||| ||||
Sbjct: 160 aagcgatggatgcctctatggcgttcagtccccactctggacttcgatgactacaa 215
>gnl|LJGI|FS342663 similar to UniRef100_A7QK60 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 675
Score = 54.0 bits (27), Expect = 1e-06
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 87 catactctcttttctcccaacaaagaacgccgtcgccaccagcgttctcgcgaagaagtg 146
||||||||| ||||||||||| ||| | |||| ||||| || |||||| | |||| |||
Sbjct: 199 catactctcctttctcccaaccaagcaaaccgttgccacaagtgttctctccaagaggtg 258
Query: 147 gaaatcactgtggcgttca 165
||| ||||||||||||||
Sbjct: 259 gaagccactgtggcgttca 277
>gnl|LJGI|TC82434 similar to UniRef100_A7QK60 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 756
Score = 54.0 bits (27), Expect = 1e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 498 ttttacctctgttgattttcccttccttaaaaccctgcatctgcaag 544
|||| |||||||| ||||||||| ||||||| ||||||||||||||
Sbjct: 626 ttttccctctgttcattttccctgccttaaagtcctgcatctgcaag 672