Miyakogusa Predicted Gene
- Lj0g3v0120479.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0120479.1 Non Chatacterized Hit- tr|I1KZ45|I1KZ45_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,34.62,3e-19,no
description,NULL; FBD,FBD; domain in FBox and BRCT domain containing
pl,FBD; seg,NULL,CUFF.7168.1
(591 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77282 133 1e-30
gnl|LJGI|BP084398 119 2e-26
gnl|LJGI|TC81934 similar to UniRef100_A7QK65 Cluster: Chromosome... 68 7e-11
gnl|LJGI|TC78334 similar to UniRef100_Q976J9 Cluster: Lysine bio... 62 4e-09
gnl|LJGI|TC61348 similar to UniRef100_A7QK65 Cluster: Chromosome... 54 1e-06
gnl|LJGI|TC75628 weakly similar to UniRef100_A2Q1U7 Cluster: Cyc... 52 4e-06
>gnl|LJGI|TC77282
Length = 497
Score = 133 bits (67), Expect = 1e-30
Identities = 112/127 (88%)
Strand = Plus / Plus
Query: 360 ttaccctcaatttgttcctgaatgccttacttcgtgtttatctaagtgctatctcgaacg 419
||||||||| ||||||||||||||||||||||| || ||| |||||||||||||| ||||
Sbjct: 27 ttaccctcattttgttcctgaatgccttacttcatgcttaactaagtgctatctcaaacg 86
Query: 420 ttaccaatttacagaaagtgacctaaaatttgcgaagtatattatgcagaattcaacata 479
|| | || ||||||| ||||||| ||||||| ||||||||||||||||| || |||||
Sbjct: 87 tttcgaaggcacagaaaatgacctacaatttgcaaagtatattatgcagaactcgacata 146
Query: 480 tttacag 486
|||||||
Sbjct: 147 tttacag 153
>gnl|LJGI|BP084398
Length = 460
Score = 119 bits (60), Expect = 2e-26
Identities = 120/140 (85%)
Strand = Plus / Minus
Query: 347 aggacgttctaacttaccctcaatttgttcctgaatgccttacttcgtgtttatctaagt 406
|||| |||||| ||||||||| ||||||||||||||||||||||| || ||| ||||||
Sbjct: 449 aggatgttctacattaccctcattttgttcctgaatgccttacttcatgcttaactaagt 390
Query: 407 gctatctcgaacgttaccaatttacagaaagtgacctaaaatttgcgaagtatattatgc 466
|||||||| |||||| | || | ||||| ||||||| ||||||| |||||| ||||||
Sbjct: 389 gctatctcaaacgtttcgaaggcatagaaaatgacctacaatttgccaagtatgttatgc 330
Query: 467 agaattcaacatatttacag 486
|||| || ||||||||||||
Sbjct: 329 agaactcgacatatttacag 310
>gnl|LJGI|TC81934 similar to UniRef100_A7QK65 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 1384
Score = 67.9 bits (34), Expect = 7e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 282 gcttttgatgcttaaaaattgccccaagcttcaaagttttaaactt 327
|||||||||||| || ||||||||||||||||| ||||||||||||
Sbjct: 884 gcttttgatgctcaagaattgccccaagcttcagagttttaaactt 929
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 146 ttctgaaagcaatatctaatgtggagtttttgaccatt 183
||||||| ||||||| ||||||||||||||||| ||||
Sbjct: 771 ttctgaatgcaatatgtaatgtggagtttttgagcatt 808
>gnl|LJGI|TC78334 similar to UniRef100_Q976J9 Cluster: Lysine biosynthesis protein
lysX; n=1; Sulfolobus tokodaii|Rep: Lysine biosynthesis
protein lysX - Sulfolobus tokodaii, partial (5%)
Length = 671
Score = 61.9 bits (31), Expect = 4e-09
Identities = 100/123 (81%)
Strand = Plus / Plus
Query: 205 gttgatgatgtggttcctgaatttcctcatttaaggcatttgaccctctccggggcttat 264
|||||||||| ||| |||||||||| |||| |||| |||||| |||||| | || | |
Sbjct: 70 gttgatgatggggtgcctgaatttcgtcatgtaagacatttgtccctcttcttggatact 129
Query: 265 agaaactcgcatttgacgcttttgatgcttaaaaattgccccaagcttcaaagttttaaa 324
|||| ||||| | |||||||||||| || ||||||||||||||||||||| || ||
Sbjct: 130 cataactggcattgggtgcttttgatgctcaagaattgccccaagcttcaaagtcttgaa 189
Query: 325 ctt 327
|||
Sbjct: 190 ctt 192
Score = 54.0 bits (27), Expect = 1e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 137 tcaagattattctgaaagcaatatctaatgtggagtttttgaccatt 183
|||| ||||||||||||||||| | |||||||||| |||||| ||||
Sbjct: 11 tcaatattattctgaaagcaatgtgtaatgtggagattttgagcatt 57
>gnl|LJGI|TC61348 similar to UniRef100_A7QK65 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 1489
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 362 accctcaatttgttcctgaatgccttacttc 392
||||||| |||||||||||||||||||||||
Sbjct: 1089 accctcattttgttcctgaatgccttacttc 1119
>gnl|LJGI|TC75628 weakly similar to UniRef100_A2Q1U7 Cluster: Cyclin-like F-box; FBD;
n=1; Medicago truncatula|Rep: Cyclin-like F-box; FBD -
Medicago truncatula (Barrel medic), partial (11%)
Length = 475
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 359 cttaccctcaatttgttcctgaatgccttacttc 392
|||||||||||||| |||||||||| ||||||||
Sbjct: 33 cttaccctcaatttattcctgaatgtcttacttc 66