Miyakogusa Predicted Gene

Lj0g3v0120319.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0120319.1 tr|D7LTK1|D7LTK1_ARALL Clathrin adaptor complex
small chain family protein OS=Arabidopsis lyrata
sub,73.68,7e-19,ADAPTOR-RELATED PROTEIN COMPLEX 3,NULL; CLATHRIN COAT
ASSEMBLY PROTEIN,Adaptor protein complex, sigm,CUFF.7142.1
         (174 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS337242 similar to UniRef100_A7PUU9 Cluster: Chromosom...   345   5e-95
gnl|LJGI|BW596016 similar to UniRef100_A7PUU9 Cluster: Chromosom...   321   8e-88
gnl|LJGI|AV424047 similar to UniRef100_A7PUU9 Cluster: Chromosom...   321   8e-88

>gnl|LJGI|FS337242 similar to UniRef100_A7PUU9 Cluster: Chromosome chr4 scaffold_32,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_32, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (72%)
          Length = 851

 Score =  345 bits (174), Expect = 5e-95
 Identities = 174/174 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgataagggcagtgctggtgctgaacacgcaggggaagcctcgtctctccaaattctat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 atgataagggcagtgctggtgctgaacacgcaggggaagcctcgtctctccaaattctat 200

                                                                       
Query: 61  gaatatcagccagtggagaagcagcaacaacttattcgcaatgtctttgctgtcttatgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaatatcagccagtggagaagcagcaacaacttattcgcaatgtctttgctgtcttatgc 260

                                                                 
Query: 121 agtagacctgaacatgtcagcaattttgtggatgctgagtccttctttggcccg 174
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtagacctgaacatgtcagcaattttgtggatgctgagtccttctttggcccg 314


>gnl|LJGI|BW596016 similar to UniRef100_A7PUU9 Cluster: Chromosome chr4 scaffold_32,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_32, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (32%)
          Length = 485

 Score =  321 bits (162), Expect = 8e-88
 Identities = 171/174 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgataagggcagtgctggtgctgaacacgcaggggaagcctcgtctctccaaattctat 60
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 294 atgataagggcagtgctggttctgaacacgcaggggaagcctcgtctctccaaattctat 353

                                                                       
Query: 61  gaatatcagccagtggagaagcagcaacaacttattcgcaatgtctttgctgtcttatgc 120
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 354 gaatatcagccagtggagaagcagcagcaacttattcgcaatgtctttgctgtcttatgc 413

                                                                 
Query: 121 agtagacctgaacatgtcagcaattttgtggatgctgagtccttctttggcccg 174
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 414 agtagacctgaacatgtcagcaattttgtggatgccgagtccttctttggcccg 467


>gnl|LJGI|AV424047 similar to UniRef100_A7PUU9 Cluster: Chromosome chr4 scaffold_32,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_32, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (49%)
          Length = 402

 Score =  321 bits (162), Expect = 8e-88
 Identities = 171/174 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgataagggcagtgctggtgctgaacacgcaggggaagcctcgtctctccaaattctat 60
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 106 atgataagggcagtgctggttctgaacacgcaggggaagcctcgtctctccaaattctat 165

                                                                       
Query: 61  gaatatcagccagtggagaagcagcaacaacttattcgcaatgtctttgctgtcttatgc 120
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 166 gaatatcagccagtggagaagcagcagcaacttattcgcaatgtctttgctgtcttatgc 225

                                                                 
Query: 121 agtagacctgaacatgtcagcaattttgtggatgctgagtccttctttggcccg 174
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 226 agtagacctgaacatgtcagcaattttgtggatgccgagtccttctttggcccg 279