Miyakogusa Predicted Gene
- Lj0g3v0119569.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0119569.1 Non Chatacterized Hit- tr|G1NJ42|G1NJ42_MELGA
Uncharacterized protein (Fragment) OS=Meleagris
gallop,41.94,0.8,seg,NULL,CUFF.7088.1
(256 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66517 283 3e-76
gnl|LJGI|BP047204 157 4e-38
gnl|LJGI|TC65754 similar to UniRef100_Q63934 Cluster: POU domain... 88 3e-17
gnl|LJGI|AV769328 weakly similar to UniRef100_A8JFD4 Cluster: Gl... 72 2e-12
gnl|LJGI|TC70550 72 2e-12
gnl|LJGI|TC69995 similar to UniRef100_Q2HBE7 Cluster: ATP-depend... 72 2e-12
gnl|LJGI|GO022351 similar to UniRef100_Q63934 Cluster: POU domai... 64 4e-10
gnl|LJGI|BW598656 similar to UniRef100_Q0DI92 Cluster: Os05g0406... 62 2e-09
gnl|LJGI|TC69209 weakly similar to UniRef100_Q7TPA7 Cluster: Ab1... 62 2e-09
gnl|LJGI|TC69471 60 7e-09
gnl|LJGI|BW596533 homologue to UniRef100_Q7TP76 Cluster: Aa2-296... 56 1e-07
gnl|LJGI|TC77093 similar to UniRef100_Q6NTE5 Cluster: Zgc:77291;... 56 1e-07
gnl|LJGI|TC66368 similar to UniRef100_UPI0000EB20E2 Cluster: Coi... 54 4e-07
>gnl|LJGI|TC66517
Length = 907
Score = 283 bits (143), Expect = 3e-76
Identities = 143/143 (100%)
Strand = Plus / Plus
Query: 114 aatcaatttgaccatcggccaccgtcactccggcgaccgccgccaccggcgtttctccgg 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 aatcaatttgaccatcggccaccgtcactccggcgaccgccgccaccggcgtttctccgg 518
Query: 174 cgagcttggttctgaaaatcaagggcaatttatcgaagctctcgacctcctcatcttata 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 cgagcttggttctgaaaatcaagggcaatttatcgaagctctcgacctcctcatcttata 578
Query: 234 ccgaaggccaaatcattactaag 256
|||||||||||||||||||||||
Sbjct: 579 ccgaaggccaaatcattactaag 601
Score = 93.7 bits (47), Expect = 5e-19
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 60 cagagcaaaccgccaccaccacactctccttctgtttccctctcgccacccgcga 114
||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 114 cagagcaaaccgccaccaccacactctccttctgtttccctctggccaaccgcga 168
>gnl|LJGI|BP047204
Length = 265
Score = 157 bits (79), Expect = 4e-38
Identities = 121/135 (89%)
Strand = Plus / Minus
Query: 122 tgaccatcggccaccgtcactccggcgaccgccgccaccggcgtttctccggcgagcttg 181
||||| |||||| ||||||||||||||||| ||||| ||||||||| |||||||||||||
Sbjct: 265 tgaccctcggcccccgtcactccggcgacccccgcccccggcgtttttccggcgagcttg 206
Query: 182 gttctgaaaatcaagggcaatttatcgaagctctcgacctcctcatcttataccgaaggc 241
||| || ||||| ||||| ||||||||||||||||||||||||| | |||||||| ||||
Sbjct: 205 gttttggaaatccagggccatttatcgaagctctcgacctcctccttttataccggaggc 146
Query: 242 caaatcattactaag 256
| |||| ||||||||
Sbjct: 145 ccaatccttactaag 131
>gnl|LJGI|TC65754 similar to UniRef100_Q63934 Cluster: POU domain, class 4,
transcription factor 2; n=1; Mus musculus|Rep: POU
domain, class 4, transcription factor 2 - Mus musculus
(Mouse), partial (6%)
Length = 805
Score = 87.7 bits (44), Expect = 3e-17
Identities = 87/100 (87%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 127 atcggccaccgtcactccggcgaccgccgccaccggcgt-ttctccggcgagcttggttc 185
|||||||||||| |||||||||||||||||| ||| ||| ||||||||||||||| ||||
Sbjct: 345 atcggccaccgtgactccggcgaccgccgccgccgccgtcttctccggcgagctttgttc 404
Query: 186 tgaaaatcaagggcaatttatcgaagctctcgacctcctc 225
||| || ||| |||||| | ||||||||| ||||||||
Sbjct: 405 tgagaaaggaggccaatttcttgaagctctcaacctcctc 444
>gnl|LJGI|AV769328 weakly similar to UniRef100_A8JFD4 Cluster: Glyoxal or galactose
oxidase; n=1; Chlamydomonas reinhardtii|Rep: Glyoxal or
galactose oxidase - Chlamydomonas reinhardtii, partial
(4%)
Length = 600
Score = 71.9 bits (36), Expect = 2e-12
Identities = 85/100 (85%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 127 atcggccaccgtcactccggcgaccgccgccaccggcgt-ttctccggcgagcttggttc 185
|||||||||||| |||||||||||||||| | ||| ||| ||||||||| ||||| ||||
Sbjct: 415 atcggccaccgtgactccggcgaccgccgtcgccgccgtcttctccggcaagctttgttc 474
Query: 186 tgaaaatcaagggcaatttatcgaagctctcgacctcctc 225
||| || ||| |||||| | ||||||||| ||||||||
Sbjct: 475 tgagaaaggaggccaatttcttgaagctctcaacctcctc 514
>gnl|LJGI|TC70550
Length = 963
Score = 71.9 bits (36), Expect = 2e-12
Identities = 85/100 (85%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 127 atcggccaccgtcactccggcgaccgccgccaccggcgt-ttctccggcgagcttggttc 185
|||||||||||| |||||||||||||||| | ||| ||| ||||||||| ||||| ||||
Sbjct: 475 atcggccaccgtgactccggcgaccgccgtcgccgccgtcttctccggcaagctttgttc 534
Query: 186 tgaaaatcaagggcaatttatcgaagctctcgacctcctc 225
||| || ||| |||||| | ||||||||| ||||||||
Sbjct: 535 tgagaaaggaggccaatttcttgaagctctcaacctcctc 574
>gnl|LJGI|TC69995 similar to UniRef100_Q2HBE7 Cluster: ATP-dependent RNA helicase
DED1; n=1; Chaetomium globosum|Rep: ATP-dependent RNA
helicase DED1 - Chaetomium globosum (Soil fungus),
partial (3%)
Length = 669
Score = 71.9 bits (36), Expect = 2e-12
Identities = 85/100 (85%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 127 atcggccaccgtcactccggcgaccgccgccaccggcgt-ttctccggcgagcttggttc 185
|||||||||||| |||||||||||||||||| ||| ||| |||||||||||| || ||||
Sbjct: 214 atcggccaccgtgactccggcgaccgccgccgccgccgtcttctccggcgagttttgttc 273
Query: 186 tgaaaatcaagggcaatttatcgaagctctcgacctcctc 225
||| || | | |||||| | ||||||||| ||||||||
Sbjct: 274 tgagaaaggatgccaatttcttgaagctctcaacctcctc 313
>gnl|LJGI|GO022351 similar to UniRef100_Q63934 Cluster: POU domain, class 4,
transcription factor 2; n=1; Mus musculus|Rep: POU
domain, class 4, transcription factor 2 - Mus musculus
(Mouse), partial (6%)
Length = 544
Score = 63.9 bits (32), Expect = 4e-10
Identities = 84/100 (84%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 127 atcggccaccgtcactccggcgaccgccgccaccggcg-tttctccggcgagcttggttc 185
|||||||||||| |||||||||||||||||| ||| || |||||||||||| || ||||
Sbjct: 355 atcggccaccgtgactccggcgaccgccgccgccgccgccttctccggcgagttttgttc 414
Query: 186 tgaaaatcaagggcaatttatcgaagctctcgacctcctc 225
||| || | | |||||| | ||||||||| ||||||||
Sbjct: 415 tgagaaaggatgccaatttcttgaagctctcaacctcctc 454
>gnl|LJGI|BW598656 similar to UniRef100_Q0DI92 Cluster: Os05g0406900 protein; n=1;
Oryza sativa Japonica Group|Rep: Os05g0406900 protein -
Oryza sativa subsp. japonica (Rice), partial (7%)
Length = 481
Score = 61.9 bits (31), Expect = 2e-09
Identities = 56/63 (88%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 127 atcggccaccgtcactccggcgaccgccgccaccggcgt-ttctccggcgagcttggttc 185
||||||||||| || ||||||||||||||| ||| ||| ||||||||||||||| ||||
Sbjct: 357 atcggccaccgcgacaccggcgaccgccgccgccgccgtcttctccggcgagctttgttc 298
Query: 186 tga 188
|||
Sbjct: 297 tga 295
>gnl|LJGI|TC69209 weakly similar to UniRef100_Q7TPA7 Cluster: Ab1-013; n=2; Rattus
norvegicus|Rep: Ab1-013 - Rattus norvegicus (Rat),
partial (9%)
Length = 1170
Score = 61.9 bits (31), Expect = 2e-09
Identities = 83/99 (83%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 127 atcggccaccgtcactccggcgaccgccgccaccggcgttt-ctccggcgagcttggttc 185
||||||||||| || ||||||||||||||| ||| ||| | ||||||||||||| ||||
Sbjct: 860 atcggccaccgcgacaccggcgaccgccgccgccgccgtctactccggcgagctttgttc 801
Query: 186 tgaaaatcaagggcaatttatcgaagctctcgacctcct 224
||| || ||| |||||| | ||||||||| |||||||
Sbjct: 800 tgagaacggaggccaatttcttgaagctctcaacctcct 762
>gnl|LJGI|TC69471
Length = 591
Score = 60.0 bits (30), Expect = 7e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 168 ctccggcgagcttggttctgaaaatcaagggcaatttatcgaagctctcgacctcctc 225
||||||||||||| ||||||||||||||||||| || | ||||| |||||||||||
Sbjct: 271 ctccggcgagcttcgttctgaaaatcaagggcagttccgcaaagctttcgacctcctc 214
>gnl|LJGI|BW596533 homologue to UniRef100_Q7TP76 Cluster: Aa2-296; n=1; Rattus
norvegicus|Rep: Aa2-296 - Rattus norvegicus (Rat),
partial (9%)
Length = 483
Score = 56.0 bits (28), Expect = 1e-07
Identities = 41/44 (93%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 146 gcgaccgccgccaccggcgt-ttctccggcgagcttggttctga 188
|||||||||||||||| ||| ||||||||||||||| |||||||
Sbjct: 272 gcgaccgccgccaccgccgtcttctccggcgagctttgttctga 315
>gnl|LJGI|TC77093 similar to UniRef100_Q6NTE5 Cluster: Zgc:77291; n=1; Danio
rerio|Rep: Zgc:77291 - Danio rerio (Zebrafish)
(Brachydanio rerio), partial (4%)
Length = 921
Score = 56.0 bits (28), Expect = 1e-07
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 127 atcggccaccgtcactccggcgaccgccgccaccggcgt-ttctccggcgag 177
|||||||||||| | |||||||||||||||| ||| ||| ||||||||||||
Sbjct: 269 atcggccaccgtgattccggcgaccgccgccgccgccgtcttctccggcgag 320
>gnl|LJGI|TC66368 similar to UniRef100_UPI0000EB20E2 Cluster: Coiled-coil
domain-containing protein 43.; n=1; Canis lupus
familiaris|Rep: Coiled-coil domain-containing protein
43. - Canis familiaris, partial (12%)
Length = 816
Score = 54.0 bits (27), Expect = 4e-07
Identities = 70/83 (84%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 143 ccggcgaccgccgccaccggcgt-ttctccggcgagcttggttctgaaaatcaagggcaa 201
||||||||||||||| | | ||| ||||||||||||||| ||||||| || ||| |||
Sbjct: 303 ccggcgaccgccgccgctgccgtcttctccggcgagctttgttctgagaacggaggccaa 362
Query: 202 tttatcgaagctctcgacctcct 224
||| | ||||||||| |||||||
Sbjct: 363 tttcttgaagctctcaacctcct 385