Miyakogusa Predicted Gene

Lj0g3v0119529.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0119529.1 Non Chatacterized Hit- tr|I1L3E4|I1L3E4_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,89.41,0,MATE
EFFLUX FAMILY PROTEIN,NULL; MULTIDRUG RESISTANCE PROTEIN,NULL;
MatE,Multi antimicrobial extrusi,CUFF.7076.1
         (1620 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV417402 similar to UniRef100_A7QVK5 Cluster: Chromosom...    90   5e-17
gnl|LJGI|TC72425 similar to UniRef100_A7PEG4 Cluster: Chromosome...    56   7e-07

>gnl|LJGI|AV417402 similar to UniRef100_A7QVK5 Cluster: Chromosome chr16 scaffold_189,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_189, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (23%)
          Length = 371

 Score = 89.7 bits (45), Expect = 5e-17
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                       
Query: 880 attccaagctgcatttcggtttgcctagaatggtggtggtatgagatcatgattttgcta 939
           ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||| || 
Sbjct: 234 attccgagctgcatttcggtttgcctcgaatggtggtggtatgaaatcatgattttactc 293

                
Query: 940 tgcgg 944
           |||||
Sbjct: 294 tgcgg 298


>gnl|LJGI|TC72425 similar to UniRef100_A7PEG4 Cluster: Chromosome chr11 scaffold_13,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_13, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (30%)
          Length = 484

 Score = 56.0 bits (28), Expect = 7e-07
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                       
Query: 886 agctgcatttcggtttgcctagaatggtggtggtatgagatcatgattttgctatgcggg 945
           |||||| |||| |||||  |||| |||||||||||||||||||||||  |||| ||||||
Sbjct: 17  agctgcgtttccgtttgtttagagtggtggtggtatgagatcatgatcgtgctctgcggg 76