Miyakogusa Predicted Gene
- Lj0g3v0118389.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0118389.1 CUFF.6981.1
(744 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61252 similar to UniRef100_A7QF31 Cluster: Chromosome... 1229 0.0
gnl|LJGI|GO031220 similar to UniRef100_A7QF31 Cluster: Chromosom... 922 0.0
gnl|LJGI|FS345866 weakly similar to UniRef100_Q6P311 Cluster: Sn... 480 e-135
gnl|LJGI|BP031818 similar to UniRef100_Q94A79 Cluster: AT3g49250... 228 4e-59
>gnl|LJGI|TC61252 similar to UniRef100_A7QF31 Cluster: Chromosome chr16 scaffold_86,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_86, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (50%)
Length = 1266
Score = 1229 bits (620), Expect = 0.0
Identities = 710/740 (95%)
Strand = Plus / Plus
Query: 1 atgcgagcgattgtttgtagaacctatgaaggagttaaagctcttgaaatgtatgacaag 60
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 atgcgagcggttgtttgtagaacctatgaaggagttaaagctcttgaaatgtatgacaat 204
Query: 61 gaaggctgcataaataaaagttctggtcttcacgggctaggtccttctattggaagacct 120
| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||
Sbjct: 205 gtaggctgcataaataaaagttctggtcttcacggtctaggtgcttctattggaaggcct 264
Query: 121 ttggatggtcgatttctagtgatatgtcttgaatctctgaggccttatactggcaaatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttggatggtcgatttctagtgatatgtcttgaatctctgaggccttatactggcaaatat 324
Query: 181 ttccttgatgactccgaacggaagttggacattttaaagccgagattacccaatggggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttccttgatgactccgaacggaagttggacattttaaagccgagattacccaatggggag 384
Query: 241 tgtccacctggatttctggggtttgctgtgaatatgattaatattgacagctggaaccta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 385 tgtccacctggatttctggggtttgctgtgaatatgattaatattgacagctgtaaccta 444
Query: 301 ttttgtgtaactcccagcggctatggcctcagagaaactcttttttataatctcttttct 360
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttttgtgtaactcccagtggctatggcctcagagaaactcttttttataatctcttttct 504
Query: 361 cgcctacaagtttataagacaagggctgaaatgatccaagcacttccttgcataagcgat 420
|| || ||||||||||||||||| ||||||||||| |||||||||||| |||||| ||
Sbjct: 505 cgtcttcaagtttataagacaagagctgaaatgatacaagcacttcctctcataagtgac 564
Query: 421 ggagctctttctttagacggagggatggttaggagttgcggtgtattttccttgggcaat 480
||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 565 ggagctctttctttagatggaggaatggttaggagttgcggtgtatttaccttgggcaat 624
Query: 481 agggaagatgttgatgtgaaatttccaaaaccagatagatcaactgaacttgatggcgag 540
|||||||||||||||||||||||||||| |||||||| ||||||||| |||||||| |||
Sbjct: 625 agggaagatgttgatgtgaaatttccaagaccagataaatcaactgagcttgatggtgag 684
Query: 541 atcgaaactgagaggcaaatgaaggatatcaaatggaagaaggaaaaggttctggaggat 600
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atcgaaacggagaggcaaatgaaggatatcaaatggaagaaggaaaaggttctggaggat 744
Query: 601 ttaaaaagggaacggactctgttggacatggcgaaattcaatttcggtaaaaagaagaat 660
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 745 ttaaaaagggaacggactctgttggacatggcgaaattcaatttcagtaaaaagaagaat 804
Query: 661 gattttctcaagtttttggcgcaaagttcatcatatgcaactcaggctcaaactacttct 720
||||| |||||| |||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 805 gatttgctcaagcttttggagcaaagttcataatatgcaactcaggctcaaactacttcg 864
Query: 721 gacagattcatacctagatg 740
||||||||||||||||||||
Sbjct: 865 gacagattcatacctagatg 884
>gnl|LJGI|GO031220 similar to UniRef100_A7QF31 Cluster: Chromosome chr16 scaffold_86,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_86, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 850
Score = 922 bits (465), Expect = 0.0
Identities = 505/512 (98%), Gaps = 6/512 (1%)
Strand = Plus / Minus
Query: 233 atggggagtgtccacctggatttctggggtttgctgtgaatatgattaatattgacagct 292
||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 843 atggggagtgtccac-tggatttctggg--ttgctgtgaatatgattaatat-gacagct 788
Query: 293 ggaacctattttgtgtaactcccagcggctatggcctcagagaaactcttttttataatc 352
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 ggaac-tattttgtgta-ctcccagcggctatggcctcagagaaactcttttttataatc 730
Query: 353 tcttttctcgcctacaagtttataagacaagggctgaaatgatccaagcacttccttgca 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 tcttttctcgcctacaagtttataagacaagggctgaaatgatccaagcacttccttgca 670
Query: 413 taagcgatggagctctttctttagacggagggatggttaggagttgcggtgtattttcct 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 taagcgatggagctctttctttagacggagggatggttaggagttgcggtgtattttcct 610
Query: 473 tgggcaatagggaagatgttgatgtgaaatttccaaaaccagatagatcaactgaacttg 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tgggcaatagggaagatgttgatgtgaaatttccaaaaccagatagatcaactgaacttg 550
Query: 533 atggcgagatcgaaactgagaggcaaatgaaggatatcaaatggaagaaggaaaaggttc 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 atggcgagatcgaaactgagaggcaaatgaaggatatcaaatggaagaaggaaaaggttc 490
Query: 593 tggaggatttaaaaagggaacggactctgttggacatggcgaaattcaatttcggtaaaa 652
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 489 tggaggatttaaaaagggaacggactctgttggacatggcgaaattcaatttcagtaaaa 430
Query: 653 agaagaatgattttctcaagtttttggcgcaaagttcatcatatgcaactcaggctcaaa 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 agaagaatgattttctcaagtttttggcgcaaagttcatcatatgcaactcaggctcaaa 370
Query: 713 ctacttctgacagattcatacctagatgaaga 744
||||||||||||||||||||||||||||||||
Sbjct: 369 ctacttctgacagattcatacctagatgaaga 338
>gnl|LJGI|FS345866 weakly similar to UniRef100_Q6P311 Cluster: Snail homolog 1; n=1;
Xenopus tropicalis|Rep: Snail homolog 1 - Xenopus
tropicalis (Western clawed frog) (Silurana tropicalis),
partial (11%)
Length = 655
Score = 480 bits (242), Expect = e-135
Identities = 288/302 (95%), Gaps = 1/302 (0%)
Strand = Plus / Minus
Query: 439 ggagggatggttaggagttgcggtgtattttccttgggcaatagggaagatgttgatgtg 498
||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 655 ggaggaatggttaggagttgcggtgtatttacct-gggcaatagggaagatgttgatgtg 597
Query: 499 aaatttccaaaaccagatagatcaactgaacttgatggcgagatcgaaactgagaggcaa 558
|||||||||| |||||||| ||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 596 aaatttccaagaccagataaatcaactgagcttgatggtgagatcgaaacggagaggcaa 537
Query: 559 atgaaggatatcaaatggaagaaggaaaaggttctggaggatttaaaaagggaacggact 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 atgaaggatatcaaatggaagaaggaaaaggttctggaggatttaaaaagggaacggact 477
Query: 619 ctgttggacatggcgaaattcaatttcggtaaaaagaagaatgattttctcaagtttttg 678
||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||
Sbjct: 476 ctgttggacatggcgaaattcaatttcagtaaaaagaagaatgatttgctcaagcttttg 417
Query: 679 gcgcaaagttcatcatatgcaactcaggctcaaactacttctgacagattcatacctaga 738
| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 416 gagcaaagttcataatatgcaactcaggctcaaactacttcggacagattcatacctaga 357
Query: 739 tg 740
||
Sbjct: 356 tg 355
>gnl|LJGI|BP031818 similar to UniRef100_Q94A79 Cluster: AT3g49250/F2K15_110; n=1;
Arabidopsis thaliana|Rep: AT3g49250/F2K15_110 -
Arabidopsis, partial (4%)
Length = 477
Score = 228 bits (115), Expect = 4e-59
Identities = 118/119 (99%)
Strand = Plus / Minus
Query: 609 ggaacggactctgttggacatggcgaaattcaatttcggtaaaaagaagaatgattttct 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ggaacggactctgttggacatggcgaaattcaatttcggtaaaaagaagaatgattttct 418
Query: 669 caagtttttggcgcaaagttcatcatatgcaactcaggctcaaactacttctgacagat 727
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 417 caagtttttggcgcaaagttcatcatatgcaactcaggctcaaactactcctgacagat 359