Miyakogusa Predicted Gene
- Lj0g3v0118189.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0118189.1 Non Chatacterized Hit- tr|F0YBM7|F0YBM7_AURAN
Putative uncharacterized protein (Fragment) OS=Aureoco,53.85,6.6,
,CUFF.6966.1
(463 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO020938 similar to UniRef100_Q9SAE9 Cluster: F3F19.18;... 797 0.0
gnl|LJGI|TC77807 similar to UniRef100_A7QMK5 Cluster: Chromosome... 291 2e-78
gnl|LJGI|GO007309 weakly similar to UniRef100_A7P464 Cluster: Ch... 274 5e-73
gnl|LJGI|DC595983 similar to UniRef100_A7QMK5 Cluster: Chromosom... 232 2e-60
gnl|LJGI|BP058657 145 3e-34
gnl|LJGI|BW612203 similar to UniRef100_A7P464 Cluster: Chromosom... 105 2e-22
gnl|LJGI|DC599106 similar to UniRef100_A7PPG5 Cluster: Chromosom... 105 2e-22
>gnl|LJGI|GO020938 similar to UniRef100_Q9SAE9 Cluster: F3F19.18; n=1; Arabidopsis
thaliana|Rep: F3F19.18 - Arabidopsis thaliana (Mouse-ear
cress), partial (4%)
Length = 655
Score = 797 bits (402), Expect = 0.0
Identities = 446/461 (96%), Gaps = 6/461 (1%)
Strand = Plus / Plus
Query: 3 ggctctatcagcgaggtctttggcgacgctggggtcggtgccgatgccggagatggatcg 62
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 70 ggctctatcagcgaggtctttggcgacggtggggtcggtgccgatgccggagatggatcg 129
Query: 63 gttctatcaacatggggatgaagaagaattttgcaatgtgctgtttttggtttccctttc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 gttctatcaacatggggatgaagaagaattttgcaatgtgctgtttttggtttccctttc 189
Query: 123 acgcttcaggtataaatacccactctatgtttggtactttttcatcaattgctctacagt 182
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 190 acgcttcaggtataaatacccactctatgtttggtacttttt------ttgctctacagt 243
Query: 183 ctacccccaaagaatttctataaaccaatacatagctttggatgttttccctaatttgtt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ctacccccaaagaatttctataaaccaatacatagctttggatgttttccctaatttgtt 303
Query: 243 gctaatgtcccaaatacagaattggtttcttgattttccttggctgtttttgttgaggca 302
|||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 304 gctaatatcccaaatacagaattggtttctttattttcctttgctgtttttgttgaggca 363
Query: 303 cgaggcaaaatgtctctggaatttcggattcaagaatgactatataatatgggtaatttg 362
||||||||| ||||||||||||||| |||||||||||| ||||||||| |||||||||||
Sbjct: 364 cgaggcaaactgtctctggaatttcagattcaagaatggctatataatctgggtaatttg 423
Query: 363 ctgttttgggtttctctttcacgcttcaggtataaataccctctctgtgtttggtacttt 422
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ctgttttgggtttccctttcacgcttcaggtataaataccctctctgtgtttggtacttt 483
Query: 423 ttcatcaatgttgctaactgcaccagttttgttttgctgat 463
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ttcatcaatgttgctaactgcaccagttttgttttgctgat 524
>gnl|LJGI|TC77807 similar to UniRef100_A7QMK5 Cluster: Chromosome chr19 scaffold_126,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_126, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 1759
Score = 291 bits (147), Expect = 2e-78
Identities = 153/155 (98%)
Strand = Plus / Plus
Query: 91 ttttgcaatgtgctgtttttggtttccctttcacgcttcaggtataaatacccactctat 150
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 309 ttttgcaatgtgctatttttggtttccctttcacgcttcaggtataaatacccactctgt 368
Query: 151 gtttggtactttttcatcaattgctctacagtctacccccaaagaatttctataaaccaa 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gtttggtactttttcatcaattgctctacagtctacccccaaagaatttctataaaccaa 428
Query: 211 tacatagctttggatgttttccctaatttgttgct 245
|||||||||||||||||||||||||||||||||||
Sbjct: 429 tacatagctttggatgttttccctaatttgttgct 463
Score = 291 bits (147), Expect = 2e-78
Identities = 172/179 (96%), Gaps = 1/179 (0%)
Strand = Plus / Plus
Query: 285 gctgtttttgttgaggcacgaggcaaaatgtctctggaatttcggattcaagaatgacta 344
||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||
Sbjct: 461 gctgtttttgttgaggcacgaggcaaactgtctctggaatttcagattcaagaatggcta 520
Query: 345 tataatatgggtaatttgctgttttgggtttctctttcacgcttcaggtataaataccct 404
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 521 tataatatgggtaatttgctgttttgggtttccctttcacgcttcaggtataaatacctt 580
Query: 405 ctctgtgtttggtactttttcatcaatgttgctaactgcaccagttttgttttgctgat 463
||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 581 ctctgtgttcggtactttttcatcaatgtt-ctaactgcaccagttttgttttgctgat 638
Score = 109 bits (55), Expect = 2e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 361 tgctgttttgggtttctctttcacgcttcaggtataaataccctctctgtgtttggtact 420
|||| |||| |||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 319 tgctatttttggtttccctttcacgcttcaggtataaatacccactctgtgtttggtact 378
Query: 421 ttttcatcaat 431
|||||||||||
Sbjct: 379 ttttcatcaat 389
Score = 101 bits (51), Expect = 4e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 101 tgctgtttttggtttccctttcacgcttcaggtataaatacccactctatgtttggtact 160
||||||||| |||||||||||||||||||||||||||||||| |||| |||| ||||||
Sbjct: 537 tgctgttttgggtttccctttcacgcttcaggtataaataccttctctgtgttcggtact 596
Query: 161 ttttcatcaat 171
|||||||||||
Sbjct: 597 ttttcatcaat 607
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 3 ggctctatcagcgaggtctttggcgacgctggggt 37
|||||||||||||||||||||||||||| ||||||
Sbjct: 272 ggctctatcagcgaggtctttggcgacggtggggt 306
>gnl|LJGI|GO007309 weakly similar to UniRef100_A7P464 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (6%)
Length = 760
Score = 274 bits (138), Expect = 5e-73
Identities = 160/166 (96%), Gaps = 1/166 (0%)
Strand = Plus / Plus
Query: 298 aggcacgaggcaaaatgtctctggaatttcggattcaagaatgactatataatatgggta 357
|||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 449 aggcacgaggcaaactgtctctggaatttcagattcaagaatggctatataatatgggta 508
Query: 358 atttgctgttttgggtttctctttcacgcttcaggtataaataccctctctgtgtttggt 417
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 atttgttgttttgggtttccctttcacgcttcaggtataaataccctctctgtgtttggt 568
Query: 418 actttttcatcaatgttgctaactgcaccagttttgttttgctgat 463
||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 569 actttttcatcaatgtt-ctaactgcaccagttttgttttgctgat 613
Score = 111 bits (56), Expect = 4e-24
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 104 tgtttttggtttccctttcacgcttcaggtataaatacccactctatgtttggtactttt 163
|||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 515 tgttttgggtttccctttcacgcttcaggtataaataccctctctgtgtttggtactttt 574
Query: 164 tcatcaat 171
||||||||
Sbjct: 575 tcatcaat 582
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 91 ttttgcaatgtgctgtttttggtttccctttcacgcttcagg 132
|||||||||||||| |||||||||||||||||||||||||||
Sbjct: 410 ttttgcaatgtgctatttttggtttccctttcacgcttcagg 451
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 3 ggctctatcagcgaggtctttggcgacgctggggt 37
|||||||||||||||||||||||||||| ||||||
Sbjct: 373 ggctctatcagcgaggtctttggcgacggtggggt 407
>gnl|LJGI|DC595983 similar to UniRef100_A7QMK5 Cluster: Chromosome chr19 scaffold_126,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_126, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 541
Score = 232 bits (117), Expect = 2e-60
Identities = 126/129 (97%)
Strand = Plus / Plus
Query: 3 ggctctatcagcgaggtctttggcgacgctggggtcggtgccgatgccggagatggatcg 62
|||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 269 ggctctatcagcgaggtctttggcgacggtggggttggtgccgatgccggagatggatcg 328
Query: 63 gttctatcaacatggggatgaagaagaattttgcaatgtgctgtttttggtttccctttc 122
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gttctatcaacatggggatggagaagaattttgcaatgtgctgtttttggtttccctttc 388
Query: 123 acgcttcag 131
|||||||||
Sbjct: 389 acgcttcag 397
>gnl|LJGI|BP058657
Length = 464
Score = 145 bits (73), Expect = 3e-34
Identities = 131/149 (87%), Gaps = 1/149 (0%)
Strand = Plus / Minus
Query: 124 cgcttcaggtataaatacccactctatgtttggtactttttcatcaattgctctacagtc 183
||||| |||||| ||||| | |||| ||||||||||||||||||| ||||||||| ||||
Sbjct: 464 cgctttaggtatgaatactctctctgtgtttggtactttttcatccattgctctatagtc 405
Query: 184 tacccccaaagaatttctataaaccaatacatagctttggatgttttccctaatttgttg 243
|| | |||| ||||||| ||||| ||||||||||||||||||||| |||||||||||
Sbjct: 404 tatctccaa-gaatttccataaaaaaatacatagctttggatgtttgtcctaatttgtta 346
Query: 244 ctaatgtcccaaatacagaattggtttct 272
|||||||||| |||||| |||||||||||
Sbjct: 345 ctaatgtccccaatacataattggtttct 317
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 384 cgcttcaggtataaataccctctctgtgtttggtactttttcatc 428
||||| |||||| ||||| ||||||||||||||||||||||||||
Sbjct: 464 cgctttaggtatgaatactctctctgtgtttggtactttttcatc 420
>gnl|LJGI|BW612203 similar to UniRef100_A7P464 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 475
Score = 105 bits (53), Expect = 2e-22
Identities = 56/57 (98%)
Strand = Plus / Minus
Query: 3 ggctctatcagcgaggtctttggcgacgctggggtcggtgccgatgccggagatgga 59
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 221 ggctctatcagcgaggtctttggcgacggtggggtcggtgccgatgccggagatgga 165
>gnl|LJGI|DC599106 similar to UniRef100_A7PPG5 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 568
Score = 105 bits (53), Expect = 2e-22
Identities = 77/85 (90%)
Strand = Plus / Plus
Query: 304 gaggcaaaatgtctctggaatttcggattcaagaatgactatataatatgggtaatttgc 363
|||||||| |||||||||||||| |||||| ||||| |||||| |||||||||||||||
Sbjct: 375 gaggcaaattgtctctggaattttagattcatgaatggctatatgatatgggtaatttgc 434
Query: 364 tgttttgggtttctctttcacgctt 388
|||||| |||||| |||||||||||
Sbjct: 435 tgtttttggtttccctttcacgctt 459
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 101 tgctgtttttggtttccctttcacgctt 128
||||||||||||||||||||||||||||
Sbjct: 432 tgctgtttttggtttccctttcacgctt 459