Miyakogusa Predicted Gene
- Lj0g3v0117519.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0117519.1 tr|B9IIP7|B9IIP7_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_777371 PE=4
SV=1,41.03,5e-16,ZF_CCHC,Zinc finger, CCHC-type; zf-CCHC,Zinc finger,
CCHC-type; zinc finger,Zinc finger, CCHC-type; ,CUFF.6923.1
(1715 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82036 weakly similar to UniRef100_A8JV07 Cluster: CG9... 1675 0.0
gnl|LJGI|TC73543 similar to UniRef100_A7PP68 Cluster: Chromosome... 551 e-156
gnl|LJGI|FS318386 similar to UniRef100_A7PP68 Cluster: Chromosom... 478 e-134
>gnl|LJGI|TC82036 weakly similar to UniRef100_A8JV07 Cluster: CG9915-PB, isoform B;
n=2; Drosophila melanogaster|Rep: CG9915-PB, isoform B -
Drosophila melanogaster (Fruit fly), partial (6%)
Length = 857
Score = 1675 bits (845), Expect = 0.0
Identities = 855/857 (99%), Gaps = 1/857 (0%)
Strand = Plus / Plus
Query: 330 cagagctcaaattggtgaggaaacctcaaatcgtccaaatgattccaaattccggcaaac 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagagctcaaattggtgaggaaacctcaaatcgtccaaatgattccaaattccggcaaac 60
Query: 390 ttgttatagatgtggtgaatcaggtcataaaatgcgaaattgtccgaaagagcattcttc 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgttatagatgtggtgaatcaggtcataaaatgcgaaattgtccgaaagagcattcttc 120
Query: 450 aggg-agaaaatatgactggtcggatgttgggcagaatagtagaattaaccaggatcata 508
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggggagaaaatatgactggtcggatgttgggcagaatagtagaattaaccaggatcata 180
Query: 509 gagttgaagatgacaataaaattggatctggttccttggtgaagctgcagtcaagtgggg 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gagttgaagatgacaataaaattggatctggttccttggtgaagctgcagtcaagtgggg 240
Query: 569 atactttatcaatgaggcgccagagaggtacaaggatgtctggttctcgacataaccgag 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atactttatcaatgaggcgccagagaggtacaaggatgtctggttctcgacataaccgag 300
Query: 629 cactatctagaaaagagtcaccaccacctgtaataaatgaaactgataggcatcgaagaa 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cactatctagaaaagagtcaccaccacctgtaataaatgaaactgataggcatcgaagaa 360
Query: 689 gggagtatggaagaaagaagcgaagcagaaatgaaagtgaatcaccaaccagatcttggg 748
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 361 gggagtatggaagaaagaagcgaagcagaaatgaaagtgaatcaccaaacagatcttggg 420
Query: 749 caaagatatcaaagtggtccgactcatcccctgtgcctgcagattactctgcatctcgct 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caaagatatcaaagtggtccgactcatcccctgtgcctgcagattactctgcatctcgct 480
Query: 809 cactctcaaattctcaatcatccaagtcattggccaggcctacttccaaatatagatcaa 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cactctcaaattctcaatcatccaagtcattggccaggcctacttccaaatatagatcaa 540
Query: 869 gatcagggtcttctagagcacattcgtcatcctcaaagttaagctcttcgtcaaaatcac 928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gatcagggtcttctagagcacattcgtcatcctcaaagttaagctcttcgtcaaaatcac 600
Query: 929 ggacttatagaggcaaaagtttgaattctaggaggtcaagctcccctacatctgtatcac 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ggacttatagaggcaaaagtttgaattctaggaggtcaagctcccctacatctgtatcac 660
Query: 989 ttaacaagcctttatcgtcgattccaactaaattccagttgaatgcaaaaagctcatcca 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttaacaagcctttatcgtcgattccaactaaattccagttgaatgcaaaaagctcatcca 720
Query: 1049 ttaatggtactgcatgtgagaatgtggatcatttggtttcacagggacagcagattggca 1108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ttaatggtactgcatgtgagaatgtggatcatttggtttcacagggacagcagattggca 780
Query: 1109 gcacaatgggattggagtatcctcaaatacaatccaaggatacatgcattgctgtcaatg 1168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gcacaatgggattggagtatcctcaaatacaatccaaggatacatgcattgctgtcaatg 840
Query: 1169 gaaaagctgctgtagac 1185
|||||||||||||||||
Sbjct: 841 gaaaagctgctgtagac 857
>gnl|LJGI|TC73543 similar to UniRef100_A7PP68 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 570
Score = 551 bits (278), Expect = e-156
Identities = 281/282 (99%)
Strand = Plus / Plus
Query: 1434 aaccatcatatccacagaggaaatgtgcatggttctcaataactatggcctggaacttcc 1493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaccatcatatccacagaggaaatgtgcatggttctcaataactatggcctggaacttcc 60
Query: 1494 aaacgattatgaaaaaagttccacaacagaggccttctttggtgctgctcggttgtggcc 1553
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 61 aaacgattatgaaaaaagttccaccacagaggccttctttggtgctgctcggttgtggcc 120
Query: 1554 ttggcatattgtttattaccgtaggttgaagaagggcccaatttcaactgagaactatgc 1613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttggcatattgtttattaccgtaggttgaagaagggcccaatttcaactgagaactatgc 180
Query: 1614 caggcgggttgctcagaatcaggaatttggcattgctgataagtatataagaagcagtag 1673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caggcgggttgctcagaatcaggaatttggcattgctgataagtatataagaagcagtag 240
Query: 1674 tggatgggaagaattcagtcttgagaaccttaacagttaata 1715
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggatgggaagaattcagtcttgagaaccttaacagttaata 282
>gnl|LJGI|FS318386 similar to UniRef100_A7PP68 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 811
Score = 478 bits (241), Expect = e-134
Identities = 241/241 (100%)
Strand = Plus / Plus
Query: 1 atgggtgaggctggaaggggtaaatctgttgaagtgcctggtgaagaggggggatatcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 atgggtgaggctggaaggggtaaatctgttgaagtgcctggtgaagaggggggatatcat 630
Query: 61 gaagatgatttcaaggattacgctggggaggaaaaagattatggggggagctttccagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 gaagatgatttcaaggattacgctggggaggaaaaagattatggggggagctttccagat 690
Query: 121 gaaggtggtggagctgttcctaacctggaggacaatggtggatggaacgagccaactcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 gaaggtggtggagctgttcctaacctggaggacaatggtggatggaacgagccaactcat 750
Query: 181 gacccatcagttgacaatgagaaaggaaattctctaggatttgatcgttatgaacctcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 gacccatcagttgacaatgagaaaggaaattctctaggatttgatcgttatgaacctcat 810
Query: 241 c 241
|
Sbjct: 811 c 811