Miyakogusa Predicted Gene

Lj0g3v0117459.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0117459.1 tr|B9P6P4|B9P6P4_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_792942
PE=4,35.03,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.6920.1
         (1315 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67307 weakly similar to UniRef100_A7PHM4 Cluster: Chr...   662   0.0  

>gnl|LJGI|TC67307 weakly similar to UniRef100_A7PHM4 Cluster: Chromosome chr17
            scaffold_16, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (6%)
          Length = 982

 Score =  662 bits (334), Expect = 0.0
 Identities = 340/342 (99%)
 Strand = Plus / Plus

                                                                        
Query: 974  tacatccagagaagaagctttctgaaagcttgaagaaacttcctgcagcatcaggcaaca 1033
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5    tacatccagagaagaagctttctgaaagcttgaagaaacttcctgcagcatcaggcaaca 64

                                                                        
Query: 1034 atgaaatatttttattggataaagaggatgtttttattcctgataaccttcacctgaaga 1093
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65   atgaaatatttttattggataaagaggatgtttttattcctgataaccttcacctgaaga 124

                                                                        
Query: 1094 agatttttgaggatgaaacggttttcgcttggtatcctcagcagaacccggcgccatcat 1153
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 125  agatttttgaggatgaaacggttttcgcttggtatcctcagcagaacctggcgccatcat 184

                                                                        
Query: 1154 cgaggtctaaattgtttgatatttacagaaaaatcggtgttcgaaatatctctgaatctc 1213
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185  tgaggtctaaattgtttgatatttacagaaaaatcggtgttcgaaatatctctgaatctc 244

                                                                        
Query: 1214 tgcagaaagaagaatcatcatttctgaatgaggttgagctccagcaggttgatccaaata 1273
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245  tgcagaaagaagaatcatcatttctgaatgaggttgagctccagcaggttgatccaaata 304

                                                      
Query: 1274 ctattttcaatgtgaagggacttgttacacttattcttggtt 1315
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305  ctattttcaatgtgaagggacttgttacacttattcttggtt 346