Miyakogusa Predicted Gene
- Lj0g3v0116309.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0116309.1 Non Chatacterized Hit- tr|Q9M3Z6|Q9M3Z6_CICAR
Putative Ruv DNA-helicase OS=Cicer arietinum PE=2
SV=1,97.65,0,SUBFAMILY NOT NAMED,NULL; RUVB-RELATED REPTIN AND
PONTIN,NULL; TIP49,TIP49, C-terminal; no descripti,CUFF.6829.1
(642 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61785 homologue to UniRef100_A7NZI9 Cluster: Chromoso... 1205 0.0
gnl|LJGI|TC74664 homologue to UniRef100_A7NZI9 Cluster: Chromoso... 850 0.0
>gnl|LJGI|TC61785 homologue to UniRef100_A7NZI9 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 769
Score = 1205 bits (608), Expect = 0.0
Identities = 608/608 (100%)
Strand = Plus / Plus
Query: 1 atggagaagatgagaatagaagaggttcagtccacaacgaagaaacagcgtgttgctacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 atggagaagatgagaatagaagaggttcagtccacaacgaagaaacagcgtgttgctacc 221
Query: 61 cacactcacatcaaaggcctcggtcttgaggcgagtggaaaagcattgccttttgcttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 cacactcacatcaaaggcctcggtcttgaggcgagtggaaaagcattgccttttgcttct 281
Query: 121 gggtttgtgggacaagcagaggcaagagaagcatgtggtcttgtggttgatatgatacgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gggtttgtgggacaagcagaggcaagagaagcatgtggtcttgtggttgatatgatacgt 341
Query: 181 cagaagaagatggctggccgtgcacttctccttgccgggccgccgggaaccggcaagacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 cagaagaagatggctggccgtgcacttctccttgccgggccgccgggaaccggcaagacg 401
Query: 241 gctttagcactcgggatatgtcaggagcttgggactaaggttcctttttgcccaatggtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gctttagcactcgggatatgtcaggagcttgggactaaggttcctttttgcccaatggtt 461
Query: 301 ggatcagaagtgtactcatctgaagtgaagaagactgaggttcttatggaaaattttaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ggatcagaagtgtactcatctgaagtgaagaagactgaggttcttatggaaaattttaga 521
Query: 361 agggctattggtctgcggattaaggaaaataaggaagtgtatgaaggggaggtaaccgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 agggctattggtctgcggattaaggaaaataaggaagtgtatgaaggggaggtaaccgag 581
Query: 421 ctctctccggaagagactgagagtgttacgggtggttatggcaaaagtattagccatgtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 ctctctccggaagagactgagagtgttacgggtggttatggcaaaagtattagccatgtg 641
Query: 481 ataattggattaaagactgtgaaaggaaccaagcaactcaagttggaccctaccatatat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 ataattggattaaagactgtgaaaggaaccaagcaactcaagttggaccctaccatatat 701
Query: 541 gatgccttgattaaggaaaaggtagctgttggggatgttatatatattgaggcaaatagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 gatgccttgattaaggaaaaggtagctgttggggatgttatatatattgaggcaaatagt 761
Query: 601 ggggctgt 608
||||||||
Sbjct: 762 ggggctgt 769
>gnl|LJGI|TC74664 homologue to UniRef100_A7NZI9 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (85%)
Length = 1300
Score = 850 bits (429), Expect = 0.0
Identities = 588/641 (91%)
Strand = Plus / Plus
Query: 1 atggagaagatgagaatagaagaggttcagtccacaacgaagaaacagcgtgttgctacc 60
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 126 atggagaagatgaaaatagaagaggttcagtccatgtcgaagaaacagcgtgttgctacc 185
Query: 61 cacactcacatcaaaggcctcggtcttgaggcgagtggaaaagcattgccttttgcttct 120
|||||||||||||||||||| ||||||||||| ||||||| ||||||||| |||||| ||
Sbjct: 186 cacactcacatcaaaggccttggtcttgaggctagtggaagagcattgccatttgctgct 245
Query: 121 gggtttgtgggacaagcagaggcaagagaagcatgtggtcttgtggttgatatgatacgt 180
||||||||||| ||||||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct: 246 gggtttgtggggcaagcagaggctagagaagcatgtggccttgtggttgacatgatacgc 305
Query: 181 cagaagaagatggctggccgtgcacttctccttgccgggccgccgggaaccggcaagacg 240
||||||||||||||||||||||| || ||||||||||| ||||| || || ||||||||
Sbjct: 306 cagaagaagatggctggccgtgccctcctccttgccggaccgcccgggactggcaagact 365
Query: 241 gctttagcactcgggatatgtcaggagcttgggactaaggttcctttttgcccaatggtt 300
||||||||||| ||||||||||||||||| || || |||||||| |||||||||||||||
Sbjct: 366 gctttagcacttgggatatgtcaggagctcggaaccaaggttccattttgcccaatggtt 425
Query: 301 ggatcagaagtgtactcatctgaagtgaagaagactgaggttcttatggaaaattttaga 360
|| |||||||| |||||||| ||||| |||||||| || ||||||||||||||||| ||
Sbjct: 426 ggctcagaagtatactcatcagaagtaaagaagacagaagttcttatggaaaatttccga 485
Query: 361 agggctattggtctgcggattaaggaaaataaggaagtgtatgaaggggaggtaaccgag 420
|||||||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||
Sbjct: 486 cgggctattggtctgcgtattaaggaaaacaaggaagtatatgaaggagaggtaaccgag 545
Query: 421 ctctctccggaagagactgagagtgttacgggtggttatggcaaaagtattagccatgtg 480
|||||||| ||||| ||||||||||| || || |||||||| ||||||||||| ||||||
Sbjct: 546 ctctctccagaagaaactgagagtgtaacaggcggttatggtaaaagtattagtcatgtg 605
Query: 481 ataattggattaaagactgtgaaaggaaccaagcaactcaagttggaccctaccatatat 540
|||||||| || ||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 606 ataattgggttgaagacagtgaaaggaaccaagcaactcaagttggaccccaccatatat 665
Query: 541 gatgccttgattaaggaaaaggtagctgttggggatgttatatatattgaggcaaatagt 600
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gatgctttgattaaggaaaaggtagctgttggggatgttatatatattgaggcaaatagt 725
Query: 601 ggggctgtgaaaagggtgggccggagtgatgcttttgctac 641
||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 726 ggggctgtgaaaagggtaggccgaagtgatgcttttgctac 766