Miyakogusa Predicted Gene

Lj0g3v0116259.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0116259.1 Non Chatacterized Hit- tr|I1J714|I1J714_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.24323 PE,82.89,0,no
description,NULL; PTR2,Proton-dependent oligopeptide transporter
family; MFS general substrate tr,CUFF.6818.1
         (1788 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61795 similar to UniRef100_A7PNV5 Cluster: Chromosome...   280   3e-74
gnl|LJGI|GO036991 weakly similar to UniRef100_A7PNV5 Cluster: Ch...   113   4e-24

>gnl|LJGI|TC61795 similar to UniRef100_A7PNV5 Cluster: Chromosome chr8 scaffold_23,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_23, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (42%)
          Length = 847

 Score =  280 bits (141), Expect = 3e-74
 Identities = 294/345 (85%)
 Strand = Plus / Plus

                                                                       
Query: 49  gagatgaaatgggttcatgattcttcattggatcacaaaggcagagttcctctccgagct 108
           |||||||||||||||||| |||||||| ||||| |||||||||| ||||| || ||||||
Sbjct: 41  gagatgaaatgggttcataattcttcaatggattacaaaggcagtgttccacttcgagct 100

                                                                       
Query: 109 tcaactggttcctggaaagcttcttttttcattattgccattgagttcagtgagaggttg 168
           ||||||||||| ||||||||| || | ||||||||||| ||||||||  | |||||||| 
Sbjct: 101 tcaactggttcttggaaagctgctctcttcattattgcaattgagttttgcgagaggtta 160

                                                                       
Query: 169 agctactttggaatagcaactagcttggtcctttacctcacaaaagttcttcatcaagat 228
           |||||||||||||| |||||||||||||||||||||||||| || ||| |||||||||| 
Sbjct: 161 agctactttggaattgcaactagcttggtcctttacctcaccaaggttattcatcaagac 220

                                                                       
Query: 229 cttaagactgcagttaagaatgtgaactactgggctggagtcaccactttgatgcctcta 288
           || || ||  |||  |  ||||||||||||||| |||| ||||||||| ||||||| || 
Sbjct: 221 ctcaaaacaacagcaagaaatgtgaactactggtctggtgtcaccactctgatgccactt 280

                                                                       
Query: 289 tttggaggattcttagccgattcatacttgggccgctacaacactgtgattgcatcatgc 348
            |||| |||||| |||||||| ||||||||||||| |||  ||| ||| |||| |||| |
Sbjct: 281 cttggtggattcatagccgatgcatacttgggccgttacgccaccgtgtttgcttcatcc 340

                                                        
Query: 349 attgtttatctcatgggtttggtcctcctttctttgtcatggttc 393
           ||||||||||| || || ||||| || ||| || |||||||||||
Sbjct: 341 attgtttatctgataggcttggtactgcttactctgtcatggttc 385



 Score =  172 bits (87), Expect = 5e-42
 Identities = 300/369 (81%), Gaps = 4/369 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1377 ttcaatgagtgtgttttggttggctccacagtttgtgattattggtgttggtgatgggtt 1436
            ||||||||||||| | |||||||  ||||||||| ||||||||||| |||| || || ||
Sbjct: 383  ttcaatgagtgtgctgtggttgggaccacagtttctgattattggttttggcgacggttt 442

                                                                        
Query: 1437 tgcccttgtggggttgcaagagtatttctatgaccaagtgccagactcaatgagaagcct 1496
            | |||||||||| ||||||||||| || ||||||||||| || || |||||||||||| |
Sbjct: 443  tacccttgtgggattgcaagagtacttttatgaccaagttccggattcaatgagaagctt 502

                                                                        
Query: 1497 aggaatagcactttacttgagtgtgcttggggctgcaaattttctcagcagtttggtgat 1556
            ||| |||||  ||||| |||||||   ||| |||||||||||| | || || ||| ||||
Sbjct: 503  aggcatagcgttttacctgagtgtcaatggagctgcaaattttgtaagtagcttgctgat 562

                                                                        
Query: 1557 aacagttattgatcatgtgactggtaagactgg---gaaaagttggattggtaaggattt 1613
            ||||||| | |||||  |||| |  |||| |||   ||| |||||| ||||| |||||||
Sbjct: 563  aacagttgtggatcaaatgacggaaaagagtgggaagaagagttggtttggtgaggattt 622

                                                                        
Query: 1614 gaacagtagcagattggacaaattctattggctactcgcggtgatgaccacattgaactt 1673
            ||| | |||  ||||||||||||||||||||||  | || |  || |||||  |||||||
Sbjct: 623  gaatactagtcgattggacaaattctattggcttttggcaggaatcaccacggtgaactt 682

                                                                        
Query: 1674 gttcatgtatgtgttctttgctaggaagtattcttataagaatgtgcagaaggttggagt 1733
            |||| ||| ||| ||||||||| | |  ||||| || |||||||||||||||||||  ||
Sbjct: 683  gttcttgtttgt-ttctttgctcgtagatattcctacaagaatgtgcagaaggttgcggt 741

                     
Query: 1734 ggctgattg 1742
             ||||||||
Sbjct: 742  cgctgattg 750


>gnl|LJGI|GO036991 weakly similar to UniRef100_A7PNV5 Cluster: Chromosome chr8
           scaffold_23, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr8 scaffold_23, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (7%)
          Length = 671

 Score =  113 bits (57), Expect = 4e-24
 Identities = 87/97 (89%)
 Strand = Plus / Plus

                                                                       
Query: 49  gagatgaaatgggttcatgattcttcattggatcacaaaggcagagttcctctccgagct 108
           |||||||||||||||||| |||||||| ||||| |||||||||| ||||| || ||||||
Sbjct: 163 gagatgaaatgggttcataattcttcaatggattacaaaggcagtgttccacttcgagct 222

                                                
Query: 109 tcaactggttcctggaaagcttcttttttcattattg 145
           ||||||||||| ||||||||| || | ||||||||||
Sbjct: 223 tcaactggttcttggaaagctgctctcttcattattg 259