Miyakogusa Predicted Gene
- Lj0g3v0116259.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0116259.1 Non Chatacterized Hit- tr|I1J714|I1J714_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.24323 PE,82.89,0,no
description,NULL; PTR2,Proton-dependent oligopeptide transporter
family; MFS general substrate tr,CUFF.6818.1
(1788 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61795 similar to UniRef100_A7PNV5 Cluster: Chromosome... 280 3e-74
gnl|LJGI|GO036991 weakly similar to UniRef100_A7PNV5 Cluster: Ch... 113 4e-24
>gnl|LJGI|TC61795 similar to UniRef100_A7PNV5 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 847
Score = 280 bits (141), Expect = 3e-74
Identities = 294/345 (85%)
Strand = Plus / Plus
Query: 49 gagatgaaatgggttcatgattcttcattggatcacaaaggcagagttcctctccgagct 108
|||||||||||||||||| |||||||| ||||| |||||||||| ||||| || ||||||
Sbjct: 41 gagatgaaatgggttcataattcttcaatggattacaaaggcagtgttccacttcgagct 100
Query: 109 tcaactggttcctggaaagcttcttttttcattattgccattgagttcagtgagaggttg 168
||||||||||| ||||||||| || | ||||||||||| |||||||| | ||||||||
Sbjct: 101 tcaactggttcttggaaagctgctctcttcattattgcaattgagttttgcgagaggtta 160
Query: 169 agctactttggaatagcaactagcttggtcctttacctcacaaaagttcttcatcaagat 228
|||||||||||||| |||||||||||||||||||||||||| || ||| ||||||||||
Sbjct: 161 agctactttggaattgcaactagcttggtcctttacctcaccaaggttattcatcaagac 220
Query: 229 cttaagactgcagttaagaatgtgaactactgggctggagtcaccactttgatgcctcta 288
|| || || ||| | ||||||||||||||| |||| ||||||||| ||||||| ||
Sbjct: 221 ctcaaaacaacagcaagaaatgtgaactactggtctggtgtcaccactctgatgccactt 280
Query: 289 tttggaggattcttagccgattcatacttgggccgctacaacactgtgattgcatcatgc 348
|||| |||||| |||||||| ||||||||||||| ||| ||| ||| |||| |||| |
Sbjct: 281 cttggtggattcatagccgatgcatacttgggccgttacgccaccgtgtttgcttcatcc 340
Query: 349 attgtttatctcatgggtttggtcctcctttctttgtcatggttc 393
||||||||||| || || ||||| || ||| || |||||||||||
Sbjct: 341 attgtttatctgataggcttggtactgcttactctgtcatggttc 385
Score = 172 bits (87), Expect = 5e-42
Identities = 300/369 (81%), Gaps = 4/369 (1%)
Strand = Plus / Plus
Query: 1377 ttcaatgagtgtgttttggttggctccacagtttgtgattattggtgttggtgatgggtt 1436
||||||||||||| | ||||||| ||||||||| ||||||||||| |||| || || ||
Sbjct: 383 ttcaatgagtgtgctgtggttgggaccacagtttctgattattggttttggcgacggttt 442
Query: 1437 tgcccttgtggggttgcaagagtatttctatgaccaagtgccagactcaatgagaagcct 1496
| |||||||||| ||||||||||| || ||||||||||| || || |||||||||||| |
Sbjct: 443 tacccttgtgggattgcaagagtacttttatgaccaagttccggattcaatgagaagctt 502
Query: 1497 aggaatagcactttacttgagtgtgcttggggctgcaaattttctcagcagtttggtgat 1556
||| ||||| ||||| ||||||| ||| |||||||||||| | || || ||| ||||
Sbjct: 503 aggcatagcgttttacctgagtgtcaatggagctgcaaattttgtaagtagcttgctgat 562
Query: 1557 aacagttattgatcatgtgactggtaagactgg---gaaaagttggattggtaaggattt 1613
||||||| | ||||| |||| | |||| ||| ||| |||||| ||||| |||||||
Sbjct: 563 aacagttgtggatcaaatgacggaaaagagtgggaagaagagttggtttggtgaggattt 622
Query: 1614 gaacagtagcagattggacaaattctattggctactcgcggtgatgaccacattgaactt 1673
||| | ||| |||||||||||||||||||||| | || | || ||||| |||||||
Sbjct: 623 gaatactagtcgattggacaaattctattggcttttggcaggaatcaccacggtgaactt 682
Query: 1674 gttcatgtatgtgttctttgctaggaagtattcttataagaatgtgcagaaggttggagt 1733
|||| ||| ||| ||||||||| | | ||||| || ||||||||||||||||||| ||
Sbjct: 683 gttcttgtttgt-ttctttgctcgtagatattcctacaagaatgtgcagaaggttgcggt 741
Query: 1734 ggctgattg 1742
||||||||
Sbjct: 742 cgctgattg 750
>gnl|LJGI|GO036991 weakly similar to UniRef100_A7PNV5 Cluster: Chromosome chr8
scaffold_23, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_23, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 671
Score = 113 bits (57), Expect = 4e-24
Identities = 87/97 (89%)
Strand = Plus / Plus
Query: 49 gagatgaaatgggttcatgattcttcattggatcacaaaggcagagttcctctccgagct 108
|||||||||||||||||| |||||||| ||||| |||||||||| ||||| || ||||||
Sbjct: 163 gagatgaaatgggttcataattcttcaatggattacaaaggcagtgttccacttcgagct 222
Query: 109 tcaactggttcctggaaagcttcttttttcattattg 145
||||||||||| ||||||||| || | ||||||||||
Sbjct: 223 tcaactggttcttggaaagctgctctcttcattattg 259