Miyakogusa Predicted Gene
- Lj0g3v0116239.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0116239.2 Non Chatacterized Hit- tr|D7TDB7|D7TDB7_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,50,1e-16,no
description,Zinc finger, RING/FYVE/PHD-type; no
description,Homeodomain-like; MYB_LIKE,Myb-like d,CUFF.6822.2
(1365 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS323794 similar to UniRef100_Q095R8 Cluster: Protease ... 1219 0.0
gnl|LJGI|TC82118 similar to UniRef100_A7Q2V4 Cluster: Chromosome... 428 e-119
>gnl|LJGI|FS323794 similar to UniRef100_Q095R8 Cluster: Protease do; n=1; Stigmatella
aurantiaca DW4/3-1|Rep: Protease do - Stigmatella
aurantiaca DW4/3-1, partial (4%)
Length = 717
Score = 1219 bits (615), Expect = 0.0
Identities = 692/718 (96%), Gaps = 6/718 (0%)
Strand = Plus / Plus
Query: 16 attggcgcgcgtaggccatcaccaaacccttctgcaaccgttccttccccctcttccatt 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 attggcgcgcgtaggccatcaccaaacccttctgcaaccgttccttccccctcttccatt 61
Query: 76 cctctcctctcaaccgttaaccaggaccaacacaccgcaaccgtcttcgacagcgacggc 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cctctcctctcaaccgttaaccaggaccaacacaccgcaaccgtcttcgacagcgacggc 121
Query: 136 gacgacaacgttccgatgacgcccgatcaccgtcccgaacccgaacctgtagacctattt 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gacgacaacgttccgatgacgcccgatcaccgtcccgaacccgaacctgtagacctattt 181
Query: 196 gacgaggacatttgcatcggttgcgatcaaagcgaggggacattgttggtttgcagcgag 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gacgaggacatttgcatcggttgcgatcaaagcgaggggacattgttggtttgcagcgag 241
Query: 256 aagggttgccccattgcaatccacgccagctgcatcggttccgaacccaaattcgatgct 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aagggttgccccattgcaatccacgccagctgcatcggttccgaacccaaattcgatgct 301
Query: 316 tctggaagcttctactgcccttattgctggtacaagcgcgcagttaatgactgtcgacag 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tctggaagcttctactgcccttattgctggtacaagcgcgcagttaatgactgtcgacag 361
Query: 376 ttgaggcaaaaggccatgatggccaaggaagctctcacaagctttctcgatagtaaaccc 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttgaggcaaaaggccatgatggccaaggaagctctcacaagctttctcgatagtaaaccc 421
Query: 436 caattagtgcgtcaagatgatggcgaggagcacgttgctgaaccgggagtgcctccggtt 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 caattagtgcgtcaagatgatggcgaggagcacgttgctgaaccgggagtgcctccggtt 481
Query: 496 ccggctcaggatatgagccgggaggaaccggtaactgtaccggaaacgggtgaaactgga 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ccggctcaggatatgagccgggaggaaccggtaactgtaccggaaacgggtgaaactgga 541
Query: 556 ggtttggaagggatagaacgctgtgaggagcacattgctgaaccgggagtgcctccggtt 615
|||||||||||||||||||||||||||||||||||||||||||||||| | || |
Sbjct: 542 ggtttggaagggatagaacgctgtgaggagcacattgctgaaccgggaatccc------t 595
Query: 616 ccggctcaggatatgagccgggaggaaccggtaactgtaccggaaacgggtgaaactgga 675
|||| |||||| ||| |||||||||||| ||||| | | | || | |||||| ||||
Sbjct: 596 ccgggtcaggacctgaatagggaggaaccggaaactgcatcaggaaggcgtgaaattgga 655
Query: 676 ggtttggaagggatagaacgctgtgaggagcacattgctgaaccgggaatccctccgg 733
||||||||||| ||||||||||||||||||||| |||||||||||||| | |||||||
Sbjct: 656 ggtttggaaggaatagaacgctgtgaggagcacgttgctgaaccgggagttcctccgg 713
Score = 531 bits (268), Expect = e-150
Identities = 271/272 (99%)
Strand = Plus / Plus
Query: 580 gaggagcacattgctgaaccgggagtgcctccggttccggctcaggatatgagccgggag 639
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gaggagcacgttgctgaaccgggagtgcctccggttccggctcaggatatgagccgggag 505
Query: 640 gaaccggtaactgtaccggaaacgggtgaaactggaggtttggaagggatagaacgctgt 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gaaccggtaactgtaccggaaacgggtgaaactggaggtttggaagggatagaacgctgt 565
Query: 700 gaggagcacattgctgaaccgggaatccctccgggtcaggacctgaatagggaggaaccg 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gaggagcacattgctgaaccgggaatccctccgggtcaggacctgaatagggaggaaccg 625
Query: 760 gaaactgcatcaggaaggcgtgaaattggaggtttggaaggaatagaacgctgtgaggag 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gaaactgcatcaggaaggcgtgaaattggaggtttggaaggaatagaacgctgtgaggag 685
Query: 820 cacgttgctgaaccgggagttcctccggctca 851
||||||||||||||||||||||||||||||||
Sbjct: 686 cacgttgctgaaccgggagttcctccggctca 717
Score = 192 bits (97), Expect = 4e-48
Identities = 160/181 (88%)
Strand = Plus / Plus
Query: 749 gggaggaaccggaaactgcatcaggaaggcgtgaaattggaggtttggaaggaatagaac 808
|||||||||||| ||||| | | | || | |||||| ||||||||||||||| |||||||
Sbjct: 501 gggaggaaccggtaactgtaccggaaacgggtgaaactggaggtttggaagggatagaac 560
Query: 809 gctgtgaggagcacgttgctgaaccgggagttcctccggctcaggacttgaattgggagg 868
|||||||||||||| |||||||||||||| | ||||||| ||||||| ||||| ||||||
Sbjct: 561 gctgtgaggagcacattgctgaaccgggaatccctccgggtcaggacctgaatagggagg 620
Query: 869 aaccggaaactgcaccgggaaggcgtgaaacgaggggtttggaaggaatagaacgctgtg 928
|||||||||||||| | ||||||||||||| | |||||||||||||||||||||||||
Sbjct: 621 aaccggaaactgcatcaggaaggcgtgaaattggaggtttggaaggaatagaacgctgtg 680
Query: 929 a 929
|
Sbjct: 681 a 681
Score = 77.8 bits (39), Expect = 2e-13
Identities = 101/122 (82%), Gaps = 6/122 (4%)
Strand = Plus / Plus
Query: 814 gaggagcacgttgctgaaccgggagttcctccg------gctcaggacttgaattgggag 867
|||||||||||||||||||||||||| |||||| |||||||| ||| |||||
Sbjct: 446 gaggagcacgttgctgaaccgggagtgcctccggttccggctcaggatatgagccgggag 505
Query: 868 gaaccggaaactgcaccgggaaggcgtgaaacgaggggtttggaaggaatagaacgctgt 927
||||||| ||||| ||||| || | ||||||| | ||||||||||| ||||||||||||
Sbjct: 506 gaaccggtaactgtaccggaaacgggtgaaactggaggtttggaagggatagaacgctgt 565
Query: 928 ga 929
||
Sbjct: 566 ga 567
>gnl|LJGI|TC82118 similar to UniRef100_A7Q2V4 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 646
Score = 428 bits (216), Expect = e-119
Identities = 216/216 (100%)
Strand = Plus / Plus
Query: 1150 ttgctgactggaaagcgaagaaggagattatattggacagatgacgaagaaaaagctctc 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgctgactggaaagcgaagaaggagattatattggacagatgacgaagaaaaagctctc 60
Query: 1210 aaggaaggagtgttaaagttctcattggaaaatcagaatatcccttggaggaaaatctta 1269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaggaaggagtgttaaagttctcattggaaaatcagaatatcccttggaggaaaatctta 120
Query: 1270 gaatttggttgtggtacatttgataagactcgtgctccttctgatctcaaagataaatgg 1329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaatttggttgtggtacatttgataagactcgtgctccttctgatctcaaagataaatgg 180
Query: 1330 aagaaaatgatctccaagcaaggatgcaagtagaac 1365
||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagaaaatgatctccaagcaaggatgcaagtagaac 216