Miyakogusa Predicted Gene
- Lj0g3v0116189.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0116189.1 Non Chatacterized Hit- tr|I1J7R6|I1J7R6_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,71.94,0,SSRCOGNITION,Structure-specific recognition protein;
STRUCTURE SPECIFIC RECOGNITION PROTEIN,NULL;
SW,NODE_69851_length_1065_cov_69.243195.path2.1
(1056 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72019 similar to UniRef100_O04235 Cluster: FACT compl... 2079 0.0
gnl|LJGI|GO038073 similar to UniRef100_O04235 Cluster: FACT comp... 111 9e-24
gnl|LJGI|FS338642 similar to UniRef100_A7PMN7 Cluster: Chromosom... 74 2e-12
gnl|LJGI|TC72950 similar to UniRef100_O04235 Cluster: FACT compl... 58 1e-07
>gnl|LJGI|TC72019 similar to UniRef100_O04235 Cluster: FACT complex subunit SSRP1; n=1;
Vicia faba|Rep: FACT complex subunit SSRP1 - Vicia faba
(Broad bean), partial (64%)
Length = 1815
Score = 2079 bits (1049), Expect = 0.0
Identities = 1056/1057 (99%), Gaps = 1/1057 (0%)
Strand = Plus / Plus
Query: 1 atggcggacgttcatctcttcaacaacatcaccctcgcaggccgcggcggcacgaaagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 atggcggacgttcatctcttcaacaacatcaccctcgcaggccgcggcggcacgaaagat 127
Query: 61 tcattcagggagaaaagtttccacatgcccaattccaacacccagtatgttagtgatgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 tcattcagggagaaaagtttccacatgcccaattccaacacccagtatgttagtgatgaa 187
Query: 121 ataatgcctatggctgatgttggtgatgaaataatgcctatggctgatgttggtgatgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ataatgcctatggctgatgttggtgatgaaataatgcctatggctgatgttggtgatgta 247
Query: 181 ataatgcctatggctgatgttggtgatgaaataatgcctatggctgatgttgatgctgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ataatgcctatggctgatgttggtgatgaaataatgcctatggctgatgttgatgctgga 307
Query: 241 ggtgaagatgctgttgttacatttgagggtattggaatctttacaccaagaggacgttac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ggtgaagatgctgttgttacatttgagggtattggaatctttacaccaagaggacgttac 367
Query: 301 agtgttgagttacacctctcattcttccgacttagaggaccggctaatgatttcaaaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 agtgttgagttacacctctcattcttccgacttagaggaccggctaatgatttcaaaatc 427
Query: 361 cagtatagcagtatagttcgcctatatttacttcctaagttaaatcagccacgtactttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 cagtatagcagtatagttcgcctatatttacttcctaagttaaatcagccacgtactttt 487
Query: 421 gtcgttattagtcttgatcctcctattcgggaaggacaaacgttgtaccctcatattgtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gtcgttattagtcttgatcctcctattcgggaaggacaaacgttgtaccctcatattgtg 547
Query: 481 atgcagtttgaatctgatttcgttgttcaatgtgaattggcaataaacgaagatctttat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 atgcagtttgaatctgatttcgttgttcaatgtgaattggcaataaacgaagatctttat 607
Query: 541 aacactaagtacaacgacaagttggagctttcttataagggtctgatccatggagtgttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 aacactaagtacaacgacaagttggagctttcttataagggtctgatccatggagtgttc 667
Query: 601 actacaatattatgtggcttgtctgggtccaaagttacaaagcctggaacatttaggagt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 actacaatattatgtggcttgtctgggtccaaagttacaaagcctggaacatttaggagt 727
Query: 661 tttgtacatggttatgcagtgaaatcatctttgaaagctgaagaaggttatctgtatccc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 tttgtacatggttatgcagtgaaatcatctttgaaagctgaagaaggttatctgtatccc 787
Query: 721 cttgagaagagcttc-ttttttctacctaaacctcccactcttattcttcacgaagagat 779
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 cttgagaagagcttctttttttctacctaaacctcccactcttattcttcacgaagagat 847
Query: 780 tgactatctgggatttgagcaacatattgcccgtggttcaaaaatatgctattttcacct 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 tgactatctgggatttgagcaacatattgcccgtggttcaaaaatatgctattttcacct 907
Query: 840 tctcatcagactaaaatctgagcaagagcatctcttctgcaatattcagagaaatgaatt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 tctcatcagactaaaatctgagcaagagcatctcttctgcaatattcagagaaatgaatt 967
Query: 900 caacaagttgactgcgtttatcatatcaaaggggttaaaattgatggacttaagaagtgc 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968 caacaagttgactgcgtttatcatatcaaaggggttaaaattgatggacttaagaagtgc 1027
Query: 960 ccatgcccagccagctgttgctttggctcggattcttgggaatgatgatgctgttgatcc 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1028 ccatgcccagccagctgttgctttggctcggattcttgggaatgatgatgctgttgatcc 1087
Query: 1020 acatctagagcgcattaaaaatgaagctggtggagat 1056
|||||||||||||||||||||||||||||||||||||
Sbjct: 1088 acatctagagcgcattaaaaatgaagctggtggagat 1124
>gnl|LJGI|GO038073 similar to UniRef100_O04235 Cluster: FACT complex subunit SSRP1; n=1;
Vicia faba|Rep: FACT complex subunit SSRP1 - Vicia faba
(Broad bean), partial (37%)
Length = 831
Score = 111 bits (56), Expect = 9e-24
Identities = 56/56 (100%)
Strand = Plus / Minus
Query: 1001 atgatgatgctgttgatccacatctagagcgcattaaaaatgaagctggtggagat 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 atgatgatgctgttgatccacatctagagcgcattaaaaatgaagctggtggagat 613
>gnl|LJGI|FS338642 similar to UniRef100_A7PMN7 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 256
Score = 73.8 bits (37), Expect = 2e-12
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 12 tcatctcttcaacaacatcaccctcgcaggccgcggcggcacgaa 56
|||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 102 tcatctcttcaacaacatcaccgtcggaggccgcggcggcacgaa 146
>gnl|LJGI|TC72950 similar to UniRef100_O04235 Cluster: FACT complex subunit SSRP1;
n=1; Vicia faba|Rep: FACT complex subunit SSRP1 - Vicia
faba (Broad bean), partial (31%)
Length = 698
Score = 58.0 bits (29), Expect = 1e-07
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 20 tcaacaacatcaccctcgcaggccgcggcggcacgaa 56
|||||||||||||||||| |||||||||||||||||
Sbjct: 115 tcaacaacatcaccctcggcggccgcggcggcacgaa 151
Score = 56.0 bits (28), Expect = 5e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 54 gaaagattcattcagggagaaaagtttccacatgcccaattccaacacccagtatgttag 113
|||||||||||| | |||| ||||||||| || || |||||||| |||||||||||| |
Sbjct: 578 gaaagattcattgatggagttaagtttccatataccaaattccaatacccagtatgttgg 637
Query: 114 tgatgaaa 121
|||||||
Sbjct: 638 cgatgaaa 645