Miyakogusa Predicted Gene
- Lj0g3v0115609.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0115609.1 Non Chatacterized Hit- tr|I1L482|I1L482_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25536 PE,78.46,0,MATE
EFFLUX FAMILY PROTEIN,NULL; MULTIDRUG RESISTANCE PROTEIN,NULL;
MatE,Multi antimicrobial extrusi,CUFF.6823.1
(975 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69358 similar to UniRef100_A7PH11 Cluster: Chromosome... 1124 0.0
gnl|LJGI|GO013204 similar to UniRef100_A7PH11 Cluster: Chromosom... 272 4e-72
gnl|LJGI|BP059180 similar to UniRef100_A7PH11 Cluster: Chromosom... 66 4e-10
>gnl|LJGI|TC69358 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 795
Score = 1124 bits (567), Expect = 0.0
Identities = 567/567 (100%)
Strand = Plus / Plus
Query: 1 atggagaaagaacaccaaaactacacctctctccattcacctttgattcaaaactcagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 atggagaaagaacaccaaaactacacctctctccattcacctttgattcaaaactcagtg 286
Query: 61 gaagaagcaggcttggtggtggttgatacaaagctaaacaacccaacagaaagaactgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gaagaagcaggcttggtggtggttgatacaaagctaaacaacccaacagaaagaactgaa 346
Query: 121 attcttgaagaagtgaagaagcagctatggctttctggtcctttgatatcagtcactctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 attcttgaagaagtgaagaagcagctatggctttctggtcctttgatatcagtcactctg 406
Query: 181 ctgaatttctgcctcaaccttatctctgtcatgtttgttggtcatcttggcgagttggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ctgaatttctgcctcaaccttatctctgtcatgtttgttggtcatcttggcgagttggct 466
Query: 241 ctctctggtgcttccatggctacttcttttgcatctgtcacgggtttcagtttattggta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ctctctggtgcttccatggctacttcttttgcatctgtcacgggtttcagtttattggta 526
Query: 301 ggaatggcaagtgccttagataccttatgtggtcaatcatatggggcaaagcagtaccgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ggaatggcaagtgccttagataccttatgtggtcaatcatatggggcaaagcagtaccgc 586
Query: 361 ttgttaggcattcacatgcagagggctatgttgattcttatggttgtcagcattccgctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 ttgttaggcattcacatgcagagggctatgttgattcttatggttgtcagcattccgctt 646
Query: 421 gcgattatttgggcaaacacaggatccatcctcattttccttggccaagatcctgagata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 gcgattatttgggcaaacacaggatccatcctcattttccttggccaagatcctgagata 706
Query: 481 tctgcagcagctggggaatatgctaagataatggttccatgcctttttggttatggtctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 tctgcagcagctggggaatatgctaagataatggttccatgcctttttggttatggtctt 766
Query: 541 ctgcaatgcctcaatagattcttacaa 567
|||||||||||||||||||||||||||
Sbjct: 767 ctgcaatgcctcaatagattcttacaa 793
>gnl|LJGI|GO013204 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 528
Score = 272 bits (137), Expect = 4e-72
Identities = 368/445 (82%)
Strand = Plus / Plus
Query: 205 tctgtcatgtttgttggtcatcttggcgagttggctctctctggtgcttccatggctact 264
||||| |||||||| || ||||| || ||| || |||| |||||||||| ||||| |||
Sbjct: 69 tctgttatgtttgtgggccatctaggtgagctgcctctggctggtgcttcaatggccact 128
Query: 265 tcttttgcatctgtcacgggtttcagtttattggtaggaatggcaagtgccttagatacc 324
|||||||| |||||||| ||| | || || ||| | |||||||| |||||||| ||||||
Sbjct: 129 tcttttgcttctgtcactggtattagcttgttgctgggaatggccagtgccttggatacc 188
Query: 325 ttatgtggtcaatcatatggggcaaagcagtaccgcttgttaggcattcacatgcagagg 384
|| ||||| || |||||||| ||||||||| || | |||||||||| |||||||| |||
Sbjct: 189 ttttgtgggcagtcatatggagcaaagcagcacagaatgttaggcatacacatgcaaagg 248
Query: 385 gctatgttgattcttatggttgtcagcattccgcttgcgattatttgggcaaacacagga 444
|| ||| | | |||| || |||||||||| || | || || ||||||||||||||| |
Sbjct: 249 gccatgctcactcttgtgattgtcagcatacccttagcaatcatttgggcaaacacaagg 308
Query: 445 tccatcctcattttccttggccaagatcctgagatatctgcagcagctggggaatatgct 504
||||| || ||||| |||||||||||||||| |||||||||| ||| ||| ||||||||
Sbjct: 309 tccattctggttttctttggccaagatcctgaaatatctgcagaagcagggaaatatgct 368
Query: 505 aagataatggttccatgcctttttggttatggtcttctgcaatgcctcaatagattctta 564
|| ||||||||||| ||||||||| ||||||||||| ||||| || || |||||||||
Sbjct: 369 cagttaatggttccaagcctttttgcctatggtcttcttcaatgtctaaacagattctta 428
Query: 565 caaacccaaaatattgtatttccaatgatgctcagctcaggagtcacgaccttgcttcac 624
||||| |||||||||||||| |||| ||| ||||||| ||||| || || ||||| ||
Sbjct: 429 caaacacaaaatattgtattgccaactatgttcagctctggagttactactttgctacat 488
Query: 625 ttttttatatgttggattttggtat 649
|| || | ||||||||||||||||
Sbjct: 489 cttgttgtgtgttggattttggtat 513
>gnl|LJGI|BP059180 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 133
Score = 65.9 bits (33), Expect = 4e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 104 caacagaaagaactgaaattcttgaagaagtgaagaagcagctatggct 152
||||||||||||| ||| ||||||||||||||| ||||||| |||||||
Sbjct: 11 caacagaaagaacagaagttcttgaagaagtgaggaagcagttatggct 59