Miyakogusa Predicted Gene

Lj0g3v0115469.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0115469.1 tr|A9SB45|A9SB45_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_163909,30.9,3e-18,Xpo1,Exportin-1/Importin-beta-like;
seg,NULL; UNCHARACTERIZED,NULL; TRANSPORTIN 3 AND IMPORTIN
13,NU,CUFF.6751.1
         (918 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC592957 similar to UniRef100_Q94A39 Cluster: At1g12930...   589   e-167

>gnl|LJGI|DC592957 similar to UniRef100_Q94A39 Cluster: At1g12930/F13K23_14; n=1;
           Arabidopsis thaliana|Rep: At1g12930/F13K23_14 -
           Arabidopsis thaliana (Mouse-ear cress), partial (13%)
          Length = 523

 Score =  589 bits (297), Expect = e-167
 Identities = 297/297 (100%)
 Strand = Plus / Plus

                                                                       
Query: 35  agatacaaaatgaaggttatcaactgcaattgggagctaaggatgctttgttaaatgctc 94
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 agatacaaaatgaaggttatcaactgcaattgggagctaaggatgctttgttaaatgctc 286

                                                                       
Query: 95  ttcttcttgcagtccaaagattcagtagtggccctccccagctcttaacgcagatttgtc 154
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ttcttcttgcagtccaaagattcagtagtggccctccccagctcttaacgcagatttgtc 346

                                                                       
Query: 155 ttgcactatctgctctcatacttcaagttgttgcacatggaaacccgattgagcagcttt 214
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ttgcactatctgctctcatacttcaagttgttgcacatggaaacccgattgagcagcttt 406

                                                                       
Query: 215 tttacagtctccagaatctgcagagccaggatggtggcaatatggctgtcctcgagatgc 274
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 tttacagtctccagaatctgcagagccaggatggtggcaatatggctgtcctcgagatgc 466

                                                                    
Query: 275 tcactgtcctcccagaggaagttgttgacagccaacgtattgactctaaaatgagtt 331
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tcactgtcctcccagaggaagttgttgacagccaacgtattgactctaaaatgagtt 523