Miyakogusa Predicted Gene

Lj0g3v0115459.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0115459.1 Non Chatacterized Hit- tr|G3UBP2|G3UBP2_LOXAF
Uncharacterized protein OS=Loxodonta africana
GN=PCNXL,40.91,9.4,seg,NULL,CUFF.6750.1
         (288 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC592957 similar to UniRef100_Q94A39 Cluster: At1g12930...   216   6e-56

>gnl|LJGI|DC592957 similar to UniRef100_Q94A39 Cluster: At1g12930/F13K23_14; n=1;
           Arabidopsis thaliana|Rep: At1g12930/F13K23_14 -
           Arabidopsis thaliana (Mouse-ear cress), partial (13%)
          Length = 523

 Score =  216 bits (109), Expect = 6e-56
 Identities = 121/125 (96%)
 Strand = Plus / Minus

                                                                       
Query: 84  gtttgtggaaactgagggagccactgattggctgcgacgcggttgcacgattgggtatcg 143
           |||||| | ||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 gtttgttggaactgaacgagccactgattggctgcgacgcggttgcacgattgggtatcg 66

                                                                       
Query: 144 tggttcaacacatggacggcctcagctaccttcattgccaattccatctcctctttctca 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65  tggttcaacacatggacggcctcagctaccttcattgccaattccatctcctctttctca 6

                
Query: 204 ctcac 208
           |||||
Sbjct: 5   ctcac 1