Miyakogusa Predicted Gene
- Lj0g3v0115009.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0115009.1 Non Chatacterized Hit- tr|K3YJ79|K3YJ79_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si014298,33.93,1e-18,Thioredoxin-like,Thioredoxin-like fold;
Thioredoxin,Thioredoxin domain; no
description,Thioredoxin-l,CUFF.6718.1
(675 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76149 similar to UniRef100_A7PW43 Cluster: Chromosome... 934 0.0
gnl|LJGI|TC79937 weakly similar to UniRef100_A7PW43 Cluster: Chr... 246 2e-64
gnl|LJGI|AV423063 weakly similar to UniRef100_A7PW43 Cluster: Ch... 161 7e-39
gnl|LJGI|TC80861 similar to UniRef100_A7PW43 Cluster: Chromosome... 103 1e-21
>gnl|LJGI|TC76149 similar to UniRef100_A7PW43 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 699
Score = 934 bits (471), Expect = 0.0
Identities = 471/471 (100%)
Strand = Plus / Plus
Query: 1 atgctcttctatgcttcatggtgcccattttcacaaaggatgctttctaaattcgaaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 atgctcttctatgcttcatggtgcccattttcacaaaggatgctttctaaattcgaaagc 288
Query: 61 cttagttccatgtttcctcaaattgagcatttggttcttgagcaatcatcagcttggcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 cttagttccatgtttcctcaaattgagcatttggttcttgagcaatcatcagcttggcca 348
Query: 121 agcttatattcaaaatacggaatacatagcttgcctgccatattacttgtgaaccagacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 agcttatattcaaaatacggaatacatagcttgcctgccatattacttgtgaaccagacc 408
Query: 181 tcaaggttgagatatcatggtccaaaatatctcctctcacttttggagttttatgagaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tcaaggttgagatatcatggtccaaaatatctcctctcacttttggagttttatgagaga 468
Query: 241 aatacgagatttgaagcgagcaataatgtcattgtaagcagcatgatgagtgatgaaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 aatacgagatttgaagcgagcaataatgtcattgtaagcagcatgatgagtgatgaaaaa 528
Query: 301 ttaaatatgaagtcgttgctgggtttgtcgcttaaagaaatatcaagtagggaaccttac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ttaaatatgaagtcgttgctgggtttgtcgcttaaagaaatatcaagtagggaaccttac 588
Query: 361 ttagtatgctctattctgtttctctgtttgaggatacttctttttgtattccctaagatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 ttagtatgctctattctgtttctctgtttgaggatacttctttttgtattccctaagatt 648
Query: 421 gtgttgcgtcttcgagcattctgggttttctgcattcctcatcttaacatg 471
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 gtgttgcgtcttcgagcattctgggttttctgcattcctcatcttaacatg 699
>gnl|LJGI|TC79937 weakly similar to UniRef100_A7PW43 Cluster: Chromosome chr8
scaffold_34, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_34, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 393
Score = 246 bits (124), Expect = 2e-64
Identities = 124/124 (100%)
Strand = Plus / Minus
Query: 552 actatgcaagaccaggatttttcatgtaagggtgaggagtgctcgggtttgggcttcatc 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 actatgcaagaccaggatttttcatgtaagggtgaggagtgctcgggtttgggcttcatc 334
Query: 612 tctagcttctgtttctctaggcgagtcaccgtctgctaggttatcatcccaaggtttgaa 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tctagcttctgtttctctaggcgagtcaccgtctgctaggttatcatcccaaggtttgaa 274
Query: 672 ctaa 675
||||
Sbjct: 273 ctaa 270
>gnl|LJGI|AV423063 weakly similar to UniRef100_A7PW43 Cluster: Chromosome chr8
scaffold_34, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_34, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (31%)
Length = 447
Score = 161 bits (81), Expect = 7e-39
Identities = 177/209 (84%)
Strand = Plus / Plus
Query: 4 ctcttctatgcttcatggtgcccattttcacaaaggatgctttctaaattcgaaagcctt 63
||||| |||||||| |||||||| ||||||| || ||||||||| |||| |||| ||||
Sbjct: 214 ctcttttatgcttcctggtgccctttttcacgcagaatgctttctgaatttgaaatcctt 273
Query: 64 agttccatgtttcctcaaattgagcatttggttcttgagcaatcatcagcttggccaagc 123
||||| |||||||||||| | |||||| ||| ||||| |||||||| |||| |||||||
Sbjct: 274 agttcaatgtttcctcaagtagagcatgtggcacttgaacaatcatctgctttgccaagc 333
Query: 124 ttatattcaaaatacggaatacatagcttgcctgccatattacttgtgaaccagacctca 183
|||||||| ||||| | || |||||||||||||| || ||||| ||||||||||| ||
Sbjct: 334 ttatattcgaaatataggatccatagcttgcctgctatcttactggtgaaccagacatct 393
Query: 184 aggttgagatatcatggtccaaaatatct 212
||| ||||||||| |||| ||||| ||||
Sbjct: 394 agggtgagatatcttggtgcaaaaaatct 422
>gnl|LJGI|TC80861 similar to UniRef100_A7PW43 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 468
Score = 103 bits (52), Expect = 1e-21
Identities = 103/120 (85%)
Strand = Plus / Plus
Query: 520 attgatgtgaggagggtttggaacaagcttagactatgcaagaccaggatttttcatgta 579
|||||||| ||||| ||||||| | |||| ||||||||||| ||||||| ||||||| |
Sbjct: 30 attgatgtcaggagtgtttggacccagctaagactatgcaaaaccaggaactttcatgaa 89
Query: 580 agggtgaggagtgctcgggtttgggcttcatctctagcttctgtttctctaggcgagtca 639
|||| |||||||| ||||||||||| |||||||| || ||||||||||| ||| |||||
Sbjct: 90 agggcgaggagtgtacgggtttgggcatcatctctggcatctgtttctctgggcaagtca 149